Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD74P04233 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD74P04233 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.72■□□□□ 0.59
CD74P04233 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD74P04233 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CD74P04233 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD74P04233 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD74P04233 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CD74P04233 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD74P04233 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CD74P04233 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.71■□□□□ 0.59
CD74P04233 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD74P04233 AC133552.2-201ENST00000619106 1032 ntBASIC18.71■□□□□ 0.59
CD74P04233 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD74P04233 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD74P04233 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CD74P04233 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.7■□□□□ 0.58
CD74P04233 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD74P04233 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD74P04233 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CD74P04233 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CD74P04233 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD74P04233 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD74P04233 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CD74P04233 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD74P04233 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CD74P04233 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.7■□□□□ 0.58
CD74P04233 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CD74P04233 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD74P04233 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD74P04233 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CD74P04233 AC018755.3-202ENST00000596210 929 ntBASIC18.69■□□□□ 0.58
CD74P04233 FAM99A-202ENST00000538190 1989 ntBASIC18.69■□□□□ 0.58
CD74P04233 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD74P04233 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.69■□□□□ 0.58
CD74P04233 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CD74P04233 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD74P04233 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CD74P04233 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD74P04233 AC010542.4-201ENST00000563151 1910 ntBASIC18.68■□□□□ 0.58
CD74P04233 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD74P04233 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.68■□□□□ 0.58
CD74P04233 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD74P04233 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD74P04233 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD74P04233 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CD74P04233 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD74P04233 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.67■□□□□ 0.58
CD74P04233 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.67■□□□□ 0.58
CD74P04233 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD74P04233 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD74P04233 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD74P04233 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
CD74P04233 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD74P04233 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CD74P04233 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD74P04233 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD74P04233 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD74P04233 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD74P04233 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CD74P04233 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD74P04233 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD74P04233 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.66■□□□□ 0.58
CD74P04233 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CD74P04233 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD74P04233 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CD74P04233 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.66■□□□□ 0.58
CD74P04233 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD74P04233 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD74P04233 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.65■□□□□ 0.58
CD74P04233 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD74P04233 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD74P04233 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD74P04233 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CD74P04233 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD74P04233 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.65■□□□□ 0.58
CD74P04233 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD74P04233 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD74P04233 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD74P04233 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.64■□□□□ 0.57
CD74P04233 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.64■□□□□ 0.57
CD74P04233 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD74P04233 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD74P04233 MIR639-201ENST00000384974 98 ntBASIC18.64■□□□□ 0.57
CD74P04233 SPCS2P3-201ENST00000500401 656 ntBASIC18.64■□□□□ 0.57
CD74P04233 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CD74P04233 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.64■□□□□ 0.57
CD74P04233 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD74P04233 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD74P04233 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD74P04233 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.64■□□□□ 0.57
CD74P04233 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD74P04233 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD74P04233 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD74P04233 AL121603.2-201ENST00000557373 2117 ntBASIC18.64■□□□□ 0.57
CD74P04233 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD74P04233 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD74P04233 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CD74P04233 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD74P04233 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms