Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.73■□□□□ 0.91
PDGFAP04085 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.73■□□□□ 0.91
PDGFAP04085 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFAP04085 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFAP04085 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFAP04085 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFAP04085 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.72■□□□□ 0.91
PDGFAP04085 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFAP04085 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFAP04085 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
PDGFAP04085 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFAP04085 AC004911.1-201ENST00000416316 871 ntBASIC20.72■□□□□ 0.91
PDGFAP04085 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.72■□□□□ 0.91
PDGFAP04085 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.72■□□□□ 0.91
PDGFAP04085 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFAP04085 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFAP04085 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PDGFAP04085 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.72■□□□□ 0.91
PDGFAP04085 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFAP04085 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFAP04085 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFAP04085 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFAP04085 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFAP04085 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
PDGFAP04085 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFAP04085 AC027612.3-201ENST00000413684 1047 ntBASIC20.71■□□□□ 0.91
PDGFAP04085 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFAP04085 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.71■□□□□ 0.91
PDGFAP04085 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.71■□□□□ 0.91
PDGFAP04085 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.71■□□□□ 0.91
PDGFAP04085 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PDGFAP04085 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFAP04085 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFAP04085 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFAP04085 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFAP04085 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFAP04085 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFAP04085 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDGFAP04085 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDGFAP04085 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDGFAP04085 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.69■□□□□ 0.9
PDGFAP04085 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.69■□□□□ 0.9
PDGFAP04085 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.69■□□□□ 0.9
PDGFAP04085 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.69■□□□□ 0.9
PDGFAP04085 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PDGFAP04085 AL358852.1-201ENST00000623174 1268 ntBASIC20.69■□□□□ 0.9
PDGFAP04085 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDGFAP04085 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDGFAP04085 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDGFAP04085 DUSP8P4-201ENST00000399538 1761 ntBASIC20.69■□□□□ 0.9
PDGFAP04085 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDGFAP04085 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDGFAP04085 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
PDGFAP04085 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDGFAP04085 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDGFAP04085 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDGFAP04085 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDGFAP04085 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDGFAP04085 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDGFAP04085 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDGFAP04085 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.68■□□□□ 0.9
PDGFAP04085 HLA-L-211ENST00000482052 1765 ntBASIC20.68■□□□□ 0.9
PDGFAP04085 AC123595.1-201ENST00000440769 1046 ntBASIC20.68■□□□□ 0.9
PDGFAP04085 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.68■□□□□ 0.9
PDGFAP04085 IGHV3-19-201ENST00000521488 291 ntBASIC20.68■□□□□ 0.9
PDGFAP04085 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDGFAP04085 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.68■□□□□ 0.9
PDGFAP04085 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.68■□□□□ 0.9
PDGFAP04085 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.68■□□□□ 0.9
PDGFAP04085 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDGFAP04085 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDGFAP04085 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDGFAP04085 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDGFAP04085 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.68■□□□□ 0.9
PDGFAP04085 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDGFAP04085 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDGFAP04085 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDGFAP04085 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PDGFAP04085 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDGFAP04085 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDGFAP04085 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.67■□□□□ 0.9
PDGFAP04085 MIR572-201ENST00000384983 95 ntBASIC20.67■□□□□ 0.9
PDGFAP04085 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.67■□□□□ 0.9
PDGFAP04085 AC012414.1-201ENST00000556676 535 ntBASIC20.67■□□□□ 0.9
PDGFAP04085 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDGFAP04085 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.67■□□□□ 0.9
PDGFAP04085 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDGFAP04085 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PDGFAP04085 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDGFAP04085 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.67■□□□□ 0.9
PDGFAP04085 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.67■□□□□ 0.9
PDGFAP04085 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PDGFAP04085 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.67■□□□□ 0.9
PDGFAP04085 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDGFAP04085 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.66■□□□□ 0.9
PDGFAP04085 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.66■□□□□ 0.9
PDGFAP04085 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.66■□□□□ 0.9
PDGFAP04085 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
PDGFAP04085 CCDC92B-201ENST00000575506 885 ntBASIC20.66■□□□□ 0.9
PDGFAP04085 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms