Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.74■□□□□ 0.91
OPN1SWP03999 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
OPN1SWP03999 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPN1SWP03999 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPN1SWP03999 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.74■□□□□ 0.91
OPN1SWP03999 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.74■□□□□ 0.91
OPN1SWP03999 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.74■□□□□ 0.91
OPN1SWP03999 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPN1SWP03999 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.74■□□□□ 0.91
OPN1SWP03999 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
OPN1SWP03999 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
OPN1SWP03999 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
OPN1SWP03999 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPN1SWP03999 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPN1SWP03999 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPN1SWP03999 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.73■□□□□ 0.91
OPN1SWP03999 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPN1SWP03999 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.73■□□□□ 0.91
OPN1SWP03999 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
OPN1SWP03999 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.73■□□□□ 0.91
OPN1SWP03999 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPN1SWP03999 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
OPN1SWP03999 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPN1SWP03999 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.72■□□□□ 0.91
OPN1SWP03999 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.72■□□□□ 0.91
OPN1SWP03999 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
OPN1SWP03999 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPN1SWP03999 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
OPN1SWP03999 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.72■□□□□ 0.91
OPN1SWP03999 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
OPN1SWP03999 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPN1SWP03999 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
OPN1SWP03999 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPN1SWP03999 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPN1SWP03999 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPN1SWP03999 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
OPN1SWP03999 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.72■□□□□ 0.91
OPN1SWP03999 AC103724.3-201ENST00000564481 992 ntBASIC20.72■□□□□ 0.91
OPN1SWP03999 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPN1SWP03999 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
OPN1SWP03999 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
OPN1SWP03999 AC127496.7-201ENST00000625110 1798 ntBASIC20.72■□□□□ 0.91
OPN1SWP03999 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
OPN1SWP03999 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
OPN1SWP03999 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
OPN1SWP03999 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
OPN1SWP03999 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
OPN1SWP03999 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.71■□□□□ 0.91
OPN1SWP03999 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
OPN1SWP03999 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.71■□□□□ 0.91
OPN1SWP03999 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
OPN1SWP03999 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
OPN1SWP03999 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
OPN1SWP03999 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
OPN1SWP03999 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
OPN1SWP03999 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
OPN1SWP03999 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
OPN1SWP03999 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
OPN1SWP03999 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
OPN1SWP03999 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
OPN1SWP03999 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
OPN1SWP03999 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
OPN1SWP03999 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.7■□□□□ 0.9
OPN1SWP03999 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.7■□□□□ 0.9
OPN1SWP03999 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.7■□□□□ 0.9
OPN1SWP03999 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
OPN1SWP03999 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
OPN1SWP03999 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
OPN1SWP03999 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
OPN1SWP03999 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.7■□□□□ 0.9
OPN1SWP03999 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
OPN1SWP03999 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.69■□□□□ 0.9
OPN1SWP03999 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
OPN1SWP03999 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OPN1SWP03999 YBX1P4-201ENST00000392794 808 ntBASIC20.69■□□□□ 0.9
OPN1SWP03999 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.69■□□□□ 0.9
OPN1SWP03999 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.69■□□□□ 0.9
OPN1SWP03999 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
OPN1SWP03999 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
OPN1SWP03999 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.69■□□□□ 0.9
OPN1SWP03999 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
OPN1SWP03999 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
OPN1SWP03999 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
OPN1SWP03999 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
OPN1SWP03999 AC144652.1-201ENST00000609974 1624 ntBASIC20.68■□□□□ 0.9
OPN1SWP03999 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.68■□□□□ 0.9
OPN1SWP03999 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
OPN1SWP03999 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
OPN1SWP03999 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
OPN1SWP03999 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
OPN1SWP03999 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OPN1SWP03999 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OPN1SWP03999 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.67■□□□□ 0.9
OPN1SWP03999 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
OPN1SWP03999 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.67■□□□□ 0.9
OPN1SWP03999 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPN1SWP03999 AC080038.3-201ENST00000623346 1952 ntBASIC20.66■□□□□ 0.9
OPN1SWP03999 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.66■□□□□ 0.9
OPN1SWP03999 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
OPN1SWP03999 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms