Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND3P03897 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
MT-ND3P03897 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.56■■□□□ 1.2
MT-ND3P03897 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
MT-ND3P03897 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MT-ND3P03897 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
MT-ND3P03897 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MT-ND3P03897 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MT-ND3P03897 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
MT-ND3P03897 AC011551.1-201ENST00000614101 683 ntBASIC22.56■■□□□ 1.2
MT-ND3P03897 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
MT-ND3P03897 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MT-ND3P03897 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
MT-ND3P03897 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.56■■□□□ 1.2
MT-ND3P03897 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MT-ND3P03897 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MT-ND3P03897 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
MT-ND3P03897 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.55■■□□□ 1.2
MT-ND3P03897 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MT-ND3P03897 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MT-ND3P03897 AC120024.1-201ENST00000562672 995 ntBASIC22.55■■□□□ 1.2
MT-ND3P03897 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.55■■□□□ 1.2
MT-ND3P03897 ESRRAP2-201ENST00000418437 1549 ntBASIC22.55■■□□□ 1.2
MT-ND3P03897 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.55■■□□□ 1.2
MT-ND3P03897 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
MT-ND3P03897 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MT-ND3P03897 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MT-ND3P03897 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
MT-ND3P03897 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MT-ND3P03897 AC137767.1-201ENST00000602918 1920 ntBASIC22.55■■□□□ 1.2
MT-ND3P03897 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
MT-ND3P03897 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MT-ND3P03897 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.54■■□□□ 1.2
MT-ND3P03897 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MT-ND3P03897 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MT-ND3P03897 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.53■■□□□ 1.2
MT-ND3P03897 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.53■■□□□ 1.2
MT-ND3P03897 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.53■■□□□ 1.2
MT-ND3P03897 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
MT-ND3P03897 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MT-ND3P03897 AC242852.2-201ENST00000615738 1807 ntBASIC22.53■■□□□ 1.2
MT-ND3P03897 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
MT-ND3P03897 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.53■■□□□ 1.2
MT-ND3P03897 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.53■■□□□ 1.2
MT-ND3P03897 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
MT-ND3P03897 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MT-ND3P03897 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
MT-ND3P03897 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
MT-ND3P03897 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MT-ND3P03897 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MT-ND3P03897 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.52■■□□□ 1.2
MT-ND3P03897 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.52■■□□□ 1.2
MT-ND3P03897 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.52■■□□□ 1.2
MT-ND3P03897 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.52■■□□□ 1.2
MT-ND3P03897 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.52■■□□□ 1.2
MT-ND3P03897 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
MT-ND3P03897 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
MT-ND3P03897 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MT-ND3P03897 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
MT-ND3P03897 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
MT-ND3P03897 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.51■■□□□ 1.19
MT-ND3P03897 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
MT-ND3P03897 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
MT-ND3P03897 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MT-ND3P03897 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.51■■□□□ 1.19
MT-ND3P03897 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
MT-ND3P03897 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MT-ND3P03897 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
MT-ND3P03897 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND3P03897 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
MT-ND3P03897 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND3P03897 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.5■■□□□ 1.19
MT-ND3P03897 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.5■■□□□ 1.19
MT-ND3P03897 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND3P03897 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND3P03897 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.5■■□□□ 1.19
MT-ND3P03897 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.5■■□□□ 1.19
MT-ND3P03897 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND3P03897 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND3P03897 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.5■■□□□ 1.19
MT-ND3P03897 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND3P03897 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.5■■□□□ 1.19
MT-ND3P03897 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND3P03897 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND3P03897 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND3P03897 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
MT-ND3P03897 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND3P03897 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND3P03897 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND3P03897 AC079630.1-202ENST00000618127 1840 ntBASIC22.49■■□□□ 1.19
MT-ND3P03897 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.49■■□□□ 1.19
MT-ND3P03897 AC021242.3-201ENST00000607598 1377 ntBASIC22.49■■□□□ 1.19
MT-ND3P03897 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
MT-ND3P03897 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.48■■□□□ 1.19
MT-ND3P03897 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
MT-ND3P03897 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MT-ND3P03897 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.48■■□□□ 1.19
MT-ND3P03897 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.48■■□□□ 1.19
MT-ND3P03897 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
MT-ND3P03897 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms