Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL1A1P02452 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL1A1P02452 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
COL1A1P02452 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC27.05■■□□□ 1.92
COL1A1P02452 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL1A1P02452 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL1A1P02452 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC27.05■■□□□ 1.92
COL1A1P02452 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL1A1P02452 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.05■■□□□ 1.92
COL1A1P02452 LINC01529-204ENST00000636474 1715 ntBASIC27.05■■□□□ 1.92
COL1A1P02452 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL1A1P02452 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL1A1P02452 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC27.04■■□□□ 1.92
COL1A1P02452 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC27.04■■□□□ 1.92
COL1A1P02452 AICDA-202ENST00000537228 667 ntTSL 5 BASIC27.04■■□□□ 1.92
COL1A1P02452 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC27.04■■□□□ 1.92
COL1A1P02452 AL137784.2-201ENST00000607332 1000 ntBASIC27.04■■□□□ 1.92
COL1A1P02452 IKBKGP1-201ENST00000612193 1073 ntBASIC27.04■■□□□ 1.92
COL1A1P02452 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL1A1P02452 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
COL1A1P02452 AC022517.1-201ENST00000592429 346 ntBASIC27.03■■□□□ 1.92
COL1A1P02452 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL1A1P02452 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL1A1P02452 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL1A1P02452 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL1A1P02452 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.02■■□□□ 1.92
COL1A1P02452 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL1A1P02452 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL1A1P02452 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.02■■□□□ 1.92
COL1A1P02452 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL1A1P02452 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL1A1P02452 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
COL1A1P02452 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL1A1P02452 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL1A1P02452 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC27.02■■□□□ 1.92
COL1A1P02452 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.01■■□□□ 1.91
COL1A1P02452 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC27.01■■□□□ 1.91
COL1A1P02452 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
COL1A1P02452 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC27.01■■□□□ 1.91
COL1A1P02452 DUX4L2-201ENST00000561772 1275 ntBASIC27.01■■□□□ 1.91
COL1A1P02452 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC27.01■■□□□ 1.91
COL1A1P02452 RAB43-208ENST00000615093 783 ntTSL 5 BASIC27.01■■□□□ 1.91
COL1A1P02452 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.01■■□□□ 1.91
COL1A1P02452 DUX4L6-201ENST00000626483 1275 ntBASIC27.01■■□□□ 1.91
COL1A1P02452 DUX4L1-201ENST00000627662 1275 ntBASIC27.01■■□□□ 1.91
COL1A1P02452 DUX4L8-201ENST00000629013 1275 ntBASIC27.01■■□□□ 1.91
COL1A1P02452 DUX4L3-201ENST00000630187 1275 ntBASIC27.01■■□□□ 1.91
COL1A1P02452 DUX4L7-201ENST00000630678 1275 ntBASIC27.01■■□□□ 1.91
COL1A1P02452 DUX4L5-201ENST00000630834 1275 ntBASIC27.01■■□□□ 1.91
COL1A1P02452 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
COL1A1P02452 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
COL1A1P02452 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
COL1A1P02452 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
COL1A1P02452 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC27.01■■□□□ 1.91
COL1A1P02452 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
COL1A1P02452 AL358852.1-201ENST00000623174 1268 ntBASIC27■■□□□ 1.91
COL1A1P02452 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
COL1A1P02452 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC27■■□□□ 1.91
COL1A1P02452 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27■■□□□ 1.91
COL1A1P02452 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27■■□□□ 1.91
COL1A1P02452 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL1A1P02452 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
COL1A1P02452 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27■■□□□ 1.91
COL1A1P02452 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
COL1A1P02452 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
COL1A1P02452 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27■■□□□ 1.91
COL1A1P02452 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
COL1A1P02452 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27■■□□□ 1.91
COL1A1P02452 AC123595.1-201ENST00000440769 1046 ntBASIC27■■□□□ 1.91
COL1A1P02452 AC092437.1-201ENST00000624794 1048 ntBASIC27■■□□□ 1.91
COL1A1P02452 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
COL1A1P02452 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL1A1P02452 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
COL1A1P02452 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL1A1P02452 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.99■■□□□ 1.91
COL1A1P02452 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.99■■□□□ 1.91
COL1A1P02452 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
COL1A1P02452 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL1A1P02452 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL1A1P02452 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL1A1P02452 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.98■■□□□ 1.91
COL1A1P02452 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
COL1A1P02452 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.98■■□□□ 1.91
COL1A1P02452 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL1A1P02452 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL1A1P02452 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.97■■□□□ 1.91
COL1A1P02452 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.97■■□□□ 1.91
COL1A1P02452 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.97■■□□□ 1.91
COL1A1P02452 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
COL1A1P02452 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
COL1A1P02452 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
COL1A1P02452 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.97■■□□□ 1.91
COL1A1P02452 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.97■■□□□ 1.91
COL1A1P02452 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
COL1A1P02452 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.97■■□□□ 1.91
COL1A1P02452 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.96■■□□□ 1.91
COL1A1P02452 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
COL1A1P02452 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
COL1A1P02452 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
COL1A1P02452 MIR6084-201ENST00000622012 110 ntBASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms