Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE6O95741 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE6O95741 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.78■■□□□ 1.08
CPNE6O95741 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE6O95741 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CPNE6O95741 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE6O95741 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.78■■□□□ 1.08
CPNE6O95741 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CPNE6O95741 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE6O95741 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.78■■□□□ 1.08
CPNE6O95741 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CPNE6O95741 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.78■■□□□ 1.08
CPNE6O95741 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE6O95741 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE6O95741 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.77■■□□□ 1.08
CPNE6O95741 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.77■■□□□ 1.08
CPNE6O95741 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE6O95741 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CPNE6O95741 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE6O95741 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE6O95741 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE6O95741 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CPNE6O95741 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CPNE6O95741 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE6O95741 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE6O95741 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CPNE6O95741 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE6O95741 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
CPNE6O95741 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE6O95741 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE6O95741 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.76■■□□□ 1.07
CPNE6O95741 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE6O95741 AC233992.3-201ENST00000607491 485 ntBASIC21.76■■□□□ 1.07
CPNE6O95741 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE6O95741 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CPNE6O95741 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE6O95741 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE6O95741 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE6O95741 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE6O95741 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE6O95741 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CPNE6O95741 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CPNE6O95741 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE6O95741 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE6O95741 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.75■■□□□ 1.07
CPNE6O95741 BX842568.3-201ENST00000418104 571 ntBASIC21.75■■□□□ 1.07
CPNE6O95741 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.75■■□□□ 1.07
CPNE6O95741 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE6O95741 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE6O95741 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.75■■□□□ 1.07
CPNE6O95741 IRS3P-201ENST00000223076 1006 ntBASIC21.74■■□□□ 1.07
CPNE6O95741 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE6O95741 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.74■■□□□ 1.07
CPNE6O95741 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE6O95741 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.74■■□□□ 1.07
CPNE6O95741 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.74■■□□□ 1.07
CPNE6O95741 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE6O95741 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CPNE6O95741 AC141586.4-201ENST00000624558 1573 ntBASIC21.74■■□□□ 1.07
CPNE6O95741 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE6O95741 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CPNE6O95741 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE6O95741 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CPNE6O95741 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE6O95741 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE6O95741 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE6O95741 AC092666.2-201ENST00000613287 246 ntBASIC21.73■■□□□ 1.07
CPNE6O95741 MIR6821-201ENST00000617625 74 ntBASIC21.73■■□□□ 1.07
CPNE6O95741 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.73■■□□□ 1.07
CPNE6O95741 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE6O95741 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CPNE6O95741 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.73■■□□□ 1.07
CPNE6O95741 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE6O95741 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE6O95741 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE6O95741 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE6O95741 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE6O95741 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE6O95741 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE6O95741 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE6O95741 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CPNE6O95741 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.72■■□□□ 1.07
CPNE6O95741 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE6O95741 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CPNE6O95741 pRNA.6-201ENST00000610482 90 ntBASIC21.72■■□□□ 1.07
CPNE6O95741 pRNA.5-201ENST00000612139 90 ntBASIC21.72■■□□□ 1.07
CPNE6O95741 pRNA.11-201ENST00000618423 90 ntBASIC21.72■■□□□ 1.07
CPNE6O95741 pRNA.13-201ENST00000619112 90 ntBASIC21.72■■□□□ 1.07
CPNE6O95741 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE6O95741 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE6O95741 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE6O95741 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.71■■□□□ 1.07
CPNE6O95741 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE6O95741 AC097381.1-201ENST00000429019 1296 ntBASIC21.71■■□□□ 1.07
CPNE6O95741 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE6O95741 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.71■■□□□ 1.07
CPNE6O95741 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE6O95741 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE6O95741 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE6O95741 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms