Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.66■□□□□ 0.74
CNOT4O95628 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT4O95628 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.66■□□□□ 0.74
CNOT4O95628 pRNA.6-201ENST00000610482 90 ntBASIC19.66■□□□□ 0.74
CNOT4O95628 pRNA.5-201ENST00000612139 90 ntBASIC19.66■□□□□ 0.74
CNOT4O95628 pRNA.11-201ENST00000618423 90 ntBASIC19.66■□□□□ 0.74
CNOT4O95628 pRNA.13-201ENST00000619112 90 ntBASIC19.66■□□□□ 0.74
CNOT4O95628 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT4O95628 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.66■□□□□ 0.74
CNOT4O95628 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT4O95628 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.65■□□□□ 0.74
CNOT4O95628 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CNOT4O95628 MIR4767-201ENST00000582827 78 ntBASIC19.65■□□□□ 0.74
CNOT4O95628 MIR5787-201ENST00000611784 55 ntBASIC19.65■□□□□ 0.74
CNOT4O95628 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.65■□□□□ 0.74
CNOT4O95628 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT4O95628 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.65■□□□□ 0.74
CNOT4O95628 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.65■□□□□ 0.74
CNOT4O95628 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNOT4O95628 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CNOT4O95628 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNOT4O95628 AC104564.3-201ENST00000582367 638 ntBASIC19.64■□□□□ 0.73
CNOT4O95628 AL031432.3-201ENST00000607698 485 ntBASIC19.64■□□□□ 0.73
CNOT4O95628 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.64■□□□□ 0.73
CNOT4O95628 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.64■□□□□ 0.73
CNOT4O95628 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.64■□□□□ 0.73
CNOT4O95628 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.64■□□□□ 0.73
CNOT4O95628 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNOT4O95628 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CNOT4O95628 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNOT4O95628 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CNOT4O95628 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.63■□□□□ 0.73
CNOT4O95628 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.63■□□□□ 0.73
CNOT4O95628 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.63■□□□□ 0.73
CNOT4O95628 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT4O95628 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.63■□□□□ 0.73
CNOT4O95628 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.63■□□□□ 0.73
CNOT4O95628 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
CNOT4O95628 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT4O95628 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CNOT4O95628 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CNOT4O95628 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CNOT4O95628 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT4O95628 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT4O95628 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT4O95628 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CNOT4O95628 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.62■□□□□ 0.73
CNOT4O95628 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.62■□□□□ 0.73
CNOT4O95628 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.62■□□□□ 0.73
CNOT4O95628 AC079630.1-202ENST00000618127 1840 ntBASIC19.62■□□□□ 0.73
CNOT4O95628 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.62■□□□□ 0.73
CNOT4O95628 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT4O95628 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CNOT4O95628 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT4O95628 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT4O95628 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT4O95628 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT4O95628 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CNOT4O95628 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT4O95628 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT4O95628 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.61■□□□□ 0.73
CNOT4O95628 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT4O95628 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT4O95628 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CNOT4O95628 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT4O95628 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT4O95628 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT4O95628 AC133637.1-201ENST00000624115 1537 ntBASIC19.61■□□□□ 0.73
CNOT4O95628 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT4O95628 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CNOT4O95628 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT4O95628 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CNOT4O95628 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT4O95628 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT4O95628 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT4O95628 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.6■□□□□ 0.73
CNOT4O95628 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT4O95628 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT4O95628 MIR939-201ENST00000401314 82 ntBASIC19.6■□□□□ 0.73
CNOT4O95628 BX842568.3-201ENST00000418104 571 ntBASIC19.6■□□□□ 0.73
CNOT4O95628 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CNOT4O95628 AC091305.1-201ENST00000479476 895 ntBASIC19.6■□□□□ 0.73
CNOT4O95628 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CNOT4O95628 AC027682.1-201ENST00000562846 899 ntBASIC19.6■□□□□ 0.73
CNOT4O95628 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.6■□□□□ 0.73
CNOT4O95628 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.6■□□□□ 0.73
CNOT4O95628 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CNOT4O95628 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CNOT4O95628 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms