Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.87■□□□□ 0.77
UBL3O95164 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.87■□□□□ 0.77
UBL3O95164 AL356441.2-201ENST00000443009 864 ntBASIC19.87■□□□□ 0.77
UBL3O95164 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.87■□□□□ 0.77
UBL3O95164 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
UBL3O95164 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBL3O95164 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBL3O95164 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBL3O95164 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.87■□□□□ 0.77
UBL3O95164 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBL3O95164 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBL3O95164 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBL3O95164 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBL3O95164 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBL3O95164 ECEL1P1-201ENST00000373592 1742 ntBASIC19.86■□□□□ 0.77
UBL3O95164 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBL3O95164 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBL3O95164 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBL3O95164 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.86■□□□□ 0.77
UBL3O95164 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBL3O95164 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.86■□□□□ 0.77
UBL3O95164 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.86■□□□□ 0.77
UBL3O95164 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.86■□□□□ 0.77
UBL3O95164 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBL3O95164 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBL3O95164 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBL3O95164 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
UBL3O95164 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBL3O95164 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBL3O95164 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.85■□□□□ 0.77
UBL3O95164 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBL3O95164 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
UBL3O95164 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UBL3O95164 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBL3O95164 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.85■□□□□ 0.77
UBL3O95164 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBL3O95164 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBL3O95164 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBL3O95164 AC092068.2-201ENST00000590491 1708 ntBASIC19.85■□□□□ 0.77
UBL3O95164 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.84■□□□□ 0.77
UBL3O95164 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBL3O95164 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBL3O95164 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.84■□□□□ 0.77
UBL3O95164 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBL3O95164 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBL3O95164 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBL3O95164 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBL3O95164 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBL3O95164 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBL3O95164 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBL3O95164 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBL3O95164 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
UBL3O95164 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
UBL3O95164 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.83■□□□□ 0.77
UBL3O95164 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.83■□□□□ 0.76
UBL3O95164 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.83■□□□□ 0.76
UBL3O95164 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.83■□□□□ 0.76
UBL3O95164 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.83■□□□□ 0.76
UBL3O95164 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBL3O95164 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.82■□□□□ 0.76
UBL3O95164 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
UBL3O95164 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBL3O95164 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
UBL3O95164 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBL3O95164 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBL3O95164 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UBL3O95164 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBL3O95164 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.81■□□□□ 0.76
UBL3O95164 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBL3O95164 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL3O95164 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL3O95164 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL3O95164 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.81■□□□□ 0.76
UBL3O95164 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL3O95164 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.81■□□□□ 0.76
UBL3O95164 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.81■□□□□ 0.76
UBL3O95164 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.81■□□□□ 0.76
UBL3O95164 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
UBL3O95164 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL3O95164 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL3O95164 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL3O95164 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBL3O95164 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBL3O95164 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBL3O95164 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
UBL3O95164 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.8■□□□□ 0.76
UBL3O95164 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.8■□□□□ 0.76
UBL3O95164 AL356740.2-201ENST00000601559 647 ntBASIC19.8■□□□□ 0.76
UBL3O95164 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.8■□□□□ 0.76
UBL3O95164 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBL3O95164 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBL3O95164 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
UBL3O95164 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.8■□□□□ 0.76
UBL3O95164 AL024507.2-201ENST00000606070 2574 ntBASIC19.8■□□□□ 0.76
UBL3O95164 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
UBL3O95164 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.8■□□□□ 0.76
UBL3O95164 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
UBL3O95164 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBL3O95164 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.79■□□□□ 0.76
UBL3O95164 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms