Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
BRD4O60885 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
BRD4O60885 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.89■■■□□ 2.54
BRD4O60885 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
BRD4O60885 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
BRD4O60885 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
BRD4O60885 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
BRD4O60885 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
BRD4O60885 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
BRD4O60885 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC30.88■■■□□ 2.53
BRD4O60885 IGHV3-19-201ENST00000521488 291 ntBASIC30.88■■■□□ 2.53
BRD4O60885 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.88■■■□□ 2.53
BRD4O60885 AC126544.1-201ENST00000580842 1059 ntBASIC30.88■■■□□ 2.53
BRD4O60885 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.88■■■□□ 2.53
BRD4O60885 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
BRD4O60885 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
BRD4O60885 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
BRD4O60885 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
BRD4O60885 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
BRD4O60885 AL358852.1-201ENST00000623174 1268 ntBASIC30.87■■■□□ 2.53
BRD4O60885 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
BRD4O60885 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
BRD4O60885 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
BRD4O60885 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
BRD4O60885 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
BRD4O60885 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
BRD4O60885 AC123595.1-201ENST00000440769 1046 ntBASIC30.86■■■□□ 2.53
BRD4O60885 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
BRD4O60885 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
BRD4O60885 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
BRD4O60885 TSPY26P-201ENST00000476365 1326 ntBASIC30.85■■■□□ 2.53
BRD4O60885 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
BRD4O60885 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
BRD4O60885 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC30.84■■■□□ 2.53
BRD4O60885 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
BRD4O60885 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
BRD4O60885 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
BRD4O60885 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.84■■■□□ 2.53
BRD4O60885 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC30.84■■■□□ 2.53
BRD4O60885 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.84■■■□□ 2.53
BRD4O60885 MIR572-201ENST00000384983 95 ntBASIC30.83■■■□□ 2.53
BRD4O60885 ASB1-202ENST00000409297 878 ntTSL 5 BASIC30.83■■■□□ 2.53
BRD4O60885 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC30.83■■■□□ 2.53
BRD4O60885 AL499627.2-201ENST00000606283 725 ntBASIC30.83■■■□□ 2.53
BRD4O60885 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC30.83■■■□□ 2.53
BRD4O60885 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
BRD4O60885 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
BRD4O60885 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
BRD4O60885 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
BRD4O60885 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC30.82■■■□□ 2.52
BRD4O60885 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
BRD4O60885 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
BRD4O60885 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
BRD4O60885 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
BRD4O60885 HACD1-201ENST00000326961 773 ntTSL 2 BASIC30.81■■■□□ 2.52
BRD4O60885 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
BRD4O60885 KRT18P5-201ENST00000436075 1291 ntBASIC30.81■■■□□ 2.52
BRD4O60885 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
BRD4O60885 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC30.81■■■□□ 2.52
BRD4O60885 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
BRD4O60885 RAB43-208ENST00000615093 783 ntTSL 5 BASIC30.81■■■□□ 2.52
BRD4O60885 AL031602.1-201ENST00000633169 911 ntBASIC30.81■■■□□ 2.52
BRD4O60885 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
BRD4O60885 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
BRD4O60885 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC30.8■■■□□ 2.52
BRD4O60885 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC30.8■■■□□ 2.52
BRD4O60885 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC30.8■■■□□ 2.52
BRD4O60885 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
BRD4O60885 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC30.8■■■□□ 2.52
BRD4O60885 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
BRD4O60885 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
BRD4O60885 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
BRD4O60885 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
BRD4O60885 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
BRD4O60885 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC30.8■■■□□ 2.52
BRD4O60885 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
BRD4O60885 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC30.79■■■□□ 2.52
BRD4O60885 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
BRD4O60885 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC30.79■■■□□ 2.52
BRD4O60885 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
BRD4O60885 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC30.79■■■□□ 2.52
BRD4O60885 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
BRD4O60885 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
BRD4O60885 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
BRD4O60885 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
BRD4O60885 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
BRD4O60885 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
BRD4O60885 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
BRD4O60885 NME4-202ENST00000382940 766 ntTSL 3 BASIC30.79■■■□□ 2.52
BRD4O60885 OR2I1P-207ENST00000453522 948 ntBASIC30.79■■■□□ 2.52
BRD4O60885 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC30.79■■■□□ 2.52
BRD4O60885 DUX4L2-201ENST00000561772 1275 ntBASIC30.79■■■□□ 2.52
BRD4O60885 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.79■■■□□ 2.52
BRD4O60885 NME4-211ENST00000620944 1193 ntTSL 2 BASIC30.79■■■□□ 2.52
BRD4O60885 DUX4L6-201ENST00000626483 1275 ntBASIC30.79■■■□□ 2.52
BRD4O60885 DUX4L1-201ENST00000627662 1275 ntBASIC30.79■■■□□ 2.52
BRD4O60885 DUX4L8-201ENST00000629013 1275 ntBASIC30.79■■■□□ 2.52
BRD4O60885 DUX4L3-201ENST00000630187 1275 ntBASIC30.79■■■□□ 2.52
BRD4O60885 DUX4L7-201ENST00000630678 1275 ntBASIC30.79■■■□□ 2.52
BRD4O60885 DUX4L5-201ENST00000630834 1275 ntBASIC30.79■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms