Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PRAMEF11O60813 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
PRAMEF11O60813 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PRAMEF11O60813 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PRAMEF11O60813 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PRAMEF11O60813 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
PRAMEF11O60813 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.64■■□□□ 1.21
PRAMEF11O60813 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PRAMEF11O60813 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PRAMEF11O60813 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.64■■□□□ 1.21
PRAMEF11O60813 AC011298.3-201ENST00000615796 283 ntBASIC22.64■■□□□ 1.21
PRAMEF11O60813 AC110285.6-201ENST00000617652 491 ntBASIC22.64■■□□□ 1.21
PRAMEF11O60813 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PRAMEF11O60813 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PRAMEF11O60813 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PRAMEF11O60813 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.63■■□□□ 1.21
PRAMEF11O60813 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.63■■□□□ 1.21
PRAMEF11O60813 AL136162.1-201ENST00000607711 1078 ntBASIC22.63■■□□□ 1.21
PRAMEF11O60813 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
PRAMEF11O60813 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.63■■□□□ 1.21
PRAMEF11O60813 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRAMEF11O60813 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
PRAMEF11O60813 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRAMEF11O60813 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRAMEF11O60813 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRAMEF11O60813 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.63■■□□□ 1.21
PRAMEF11O60813 AC133637.1-201ENST00000624115 1537 ntBASIC22.62■■□□□ 1.21
PRAMEF11O60813 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.62■■□□□ 1.21
PRAMEF11O60813 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PRAMEF11O60813 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PRAMEF11O60813 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
PRAMEF11O60813 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.61■■□□□ 1.21
PRAMEF11O60813 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PRAMEF11O60813 AC024257.2-201ENST00000549699 147 ntBASIC22.61■■□□□ 1.21
PRAMEF11O60813 AC136469.2-201ENST00000623944 1028 ntBASIC22.61■■□□□ 1.21
PRAMEF11O60813 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.61■■□□□ 1.21
PRAMEF11O60813 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PRAMEF11O60813 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PRAMEF11O60813 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.61■■□□□ 1.21
PRAMEF11O60813 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PRAMEF11O60813 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PRAMEF11O60813 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.6■■□□□ 1.21
PRAMEF11O60813 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PRAMEF11O60813 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PRAMEF11O60813 AC135279.3-201ENST00000610945 1311 ntBASIC22.6■■□□□ 1.21
PRAMEF11O60813 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PRAMEF11O60813 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PRAMEF11O60813 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.6■■□□□ 1.21
PRAMEF11O60813 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.6■■□□□ 1.21
PRAMEF11O60813 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.6■■□□□ 1.21
PRAMEF11O60813 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PRAMEF11O60813 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
PRAMEF11O60813 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.6■■□□□ 1.21
PRAMEF11O60813 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PRAMEF11O60813 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PRAMEF11O60813 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PRAMEF11O60813 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PRAMEF11O60813 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.59■■□□□ 1.21
PRAMEF11O60813 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PRAMEF11O60813 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.59■■□□□ 1.21
PRAMEF11O60813 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PRAMEF11O60813 AL139246.5-201ENST00000606645 996 ntBASIC22.59■■□□□ 1.21
PRAMEF11O60813 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.59■■□□□ 1.21
PRAMEF11O60813 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PRAMEF11O60813 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PRAMEF11O60813 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PRAMEF11O60813 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PRAMEF11O60813 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PRAMEF11O60813 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PRAMEF11O60813 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.58■■□□□ 1.21
PRAMEF11O60813 PBX2P1-201ENST00000493219 1291 ntBASIC22.58■■□□□ 1.21
PRAMEF11O60813 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.58■■□□□ 1.21
PRAMEF11O60813 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.58■■□□□ 1.21
PRAMEF11O60813 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PRAMEF11O60813 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.58■■□□□ 1.21
PRAMEF11O60813 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.58■■□□□ 1.21
PRAMEF11O60813 AC106739.1-201ENST00000617035 715 ntBASIC22.58■■□□□ 1.21
PRAMEF11O60813 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PRAMEF11O60813 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
PRAMEF11O60813 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PRAMEF11O60813 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PRAMEF11O60813 AC004687.1-201ENST00000579003 1625 ntBASIC22.57■■□□□ 1.2
PRAMEF11O60813 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PRAMEF11O60813 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
PRAMEF11O60813 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PRAMEF11O60813 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PRAMEF11O60813 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PRAMEF11O60813 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PRAMEF11O60813 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.57■■□□□ 1.2
PRAMEF11O60813 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PRAMEF11O60813 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
PRAMEF11O60813 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
PRAMEF11O60813 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PRAMEF11O60813 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.57■■□□□ 1.2
PRAMEF11O60813 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.57■■□□□ 1.2
PRAMEF11O60813 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PRAMEF11O60813 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PRAMEF11O60813 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PRAMEF11O60813 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.57■■□□□ 1.2
PRAMEF11O60813 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms