Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CUBNO60494 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18■□□□□ 0.47
CUBNO60494 AC098590.1-201ENST00000468126 897 ntBASIC18■□□□□ 0.47
CUBNO60494 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18■□□□□ 0.47
CUBNO60494 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18■□□□□ 0.47
CUBNO60494 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.99■□□□□ 0.47
CUBNO60494 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.99■□□□□ 0.47
CUBNO60494 AC098934.4-201ENST00000564127 592 ntBASIC17.99■□□□□ 0.47
CUBNO60494 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CUBNO60494 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.99■□□□□ 0.47
CUBNO60494 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.99■□□□□ 0.47
CUBNO60494 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUBNO60494 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUBNO60494 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.99■□□□□ 0.47
CUBNO60494 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.99■□□□□ 0.47
CUBNO60494 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CUBNO60494 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUBNO60494 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CUBNO60494 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CUBNO60494 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUBNO60494 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.99■□□□□ 0.47
CUBNO60494 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.99■□□□□ 0.47
CUBNO60494 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.99■□□□□ 0.47
CUBNO60494 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CUBNO60494 AC011767.1-201ENST00000617410 1153 ntBASIC17.98■□□□□ 0.47
CUBNO60494 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.98■□□□□ 0.47
CUBNO60494 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.98■□□□□ 0.47
CUBNO60494 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CUBNO60494 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CUBNO60494 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CUBNO60494 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.98■□□□□ 0.47
CUBNO60494 AC092803.2-201ENST00000564287 1899 ntBASIC17.98■□□□□ 0.47
CUBNO60494 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CUBNO60494 AP004607.4-201ENST00000530158 1459 ntBASIC17.97■□□□□ 0.47
CUBNO60494 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUBNO60494 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUBNO60494 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CUBNO60494 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CUBNO60494 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.97■□□□□ 0.47
CUBNO60494 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CUBNO60494 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.97■□□□□ 0.47
CUBNO60494 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CUBNO60494 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.96■□□□□ 0.47
CUBNO60494 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.96■□□□□ 0.47
CUBNO60494 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 AC069152.1-201ENST00000438030 544 ntBASIC17.96■□□□□ 0.47
CUBNO60494 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.96■□□□□ 0.47
CUBNO60494 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.96■□□□□ 0.47
CUBNO60494 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CUBNO60494 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUBNO60494 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CUBNO60494 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.96■□□□□ 0.46
CUBNO60494 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CUBNO60494 AL121749.1-202ENST00000609313 2153 ntBASIC17.95■□□□□ 0.46
CUBNO60494 LINC02228-203ENST00000641970 1355 ntBASIC17.95■□□□□ 0.46
CUBNO60494 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CUBNO60494 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.95■□□□□ 0.46
CUBNO60494 AC010525.1-201ENST00000585559 441 ntBASIC17.95■□□□□ 0.46
CUBNO60494 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CUBNO60494 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CUBNO60494 GPX1P1-201ENST00000388829 606 ntBASIC17.95■□□□□ 0.46
CUBNO60494 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CUBNO60494 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.95■□□□□ 0.46
CUBNO60494 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CUBNO60494 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CUBNO60494 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CUBNO60494 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CUBNO60494 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.95■□□□□ 0.46
CUBNO60494 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CUBNO60494 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.94■□□□□ 0.46
CUBNO60494 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.94■□□□□ 0.46
CUBNO60494 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CUBNO60494 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.94■□□□□ 0.46
CUBNO60494 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CUBNO60494 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.94■□□□□ 0.46
CUBNO60494 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CUBNO60494 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.94■□□□□ 0.46
CUBNO60494 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.94■□□□□ 0.46
CUBNO60494 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CUBNO60494 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUBNO60494 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUBNO60494 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.94■□□□□ 0.46
CUBNO60494 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.94■□□□□ 0.46
CUBNO60494 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUBNO60494 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CUBNO60494 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.93■□□□□ 0.46
CUBNO60494 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CUBNO60494 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CUBNO60494 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CUBNO60494 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms