Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDH7O60245 FP325331.1-202ENST00000623531 1380 ntBASIC21.21■□□□□ 0.99
PCDH7O60245 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH7O60245 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
PCDH7O60245 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH7O60245 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH7O60245 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH7O60245 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.2■□□□□ 0.98
PCDH7O60245 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDH7O60245 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDH7O60245 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDH7O60245 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH7O60245 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH7O60245 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH7O60245 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH7O60245 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH7O60245 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.19■□□□□ 0.98
PCDH7O60245 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PCDH7O60245 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
PCDH7O60245 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH7O60245 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDH7O60245 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDH7O60245 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH7O60245 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH7O60245 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDH7O60245 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH7O60245 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH7O60245 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
PCDH7O60245 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.18■□□□□ 0.98
PCDH7O60245 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH7O60245 MIR6724-1-201ENST00000616420 92 ntBASIC21.18■□□□□ 0.98
PCDH7O60245 MIR6724-2-201ENST00000616483 92 ntBASIC21.18■□□□□ 0.98
PCDH7O60245 MIR6724-4-201ENST00000617390 92 ntBASIC21.18■□□□□ 0.98
PCDH7O60245 MIR6724-3-201ENST00000622482 92 ntBASIC21.18■□□□□ 0.98
PCDH7O60245 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH7O60245 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH7O60245 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
PCDH7O60245 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH7O60245 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDH7O60245 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH7O60245 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PCDH7O60245 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH7O60245 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH7O60245 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDH7O60245 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH7O60245 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH7O60245 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH7O60245 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDH7O60245 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH7O60245 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDH7O60245 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDH7O60245 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH7O60245 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDH7O60245 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
PCDH7O60245 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH7O60245 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDH7O60245 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH7O60245 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PCDH7O60245 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH7O60245 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDH7O60245 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDH7O60245 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
PCDH7O60245 KRT16P3-201ENST00000439127 1283 ntBASIC21.16■□□□□ 0.98
PCDH7O60245 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDH7O60245 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH7O60245 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDH7O60245 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH7O60245 GUSBP5-202ENST00000510805 1989 ntBASIC21.16■□□□□ 0.98
PCDH7O60245 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH7O60245 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH7O60245 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDH7O60245 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH7O60245 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH7O60245 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH7O60245 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH7O60245 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH7O60245 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDH7O60245 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH7O60245 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDH7O60245 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH7O60245 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH7O60245 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH7O60245 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
PCDH7O60245 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PCDH7O60245 ESRRAP2-201ENST00000418437 1549 ntBASIC21.14■□□□□ 0.98
PCDH7O60245 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.14■□□□□ 0.98
PCDH7O60245 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
PCDH7O60245 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH7O60245 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
PCDH7O60245 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH7O60245 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDH7O60245 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH7O60245 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDH7O60245 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH7O60245 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDH7O60245 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDH7O60245 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDH7O60245 DUX4L4-201ENST00000566884 1269 ntBASIC21.14■□□□□ 0.97
PCDH7O60245 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDH7O60245 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms