Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC28A2O43868 AC034268.1-201ENST00000441047 882 ntBASIC21.3■■□□□ 1
SLC28A2O43868 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SLC28A2O43868 AC027682.1-201ENST00000562846 899 ntBASIC21.3■■□□□ 1
SLC28A2O43868 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC28A2O43868 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SLC28A2O43868 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SLC28A2O43868 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SLC28A2O43868 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.29■■□□□ 1
SLC28A2O43868 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.29■■□□□ 1
SLC28A2O43868 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.29■■□□□ 1
SLC28A2O43868 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC28A2O43868 SLC47A1P1-202ENST00000449666 945 ntBASIC21.29■■□□□ 1
SLC28A2O43868 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC28A2O43868 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC28A2O43868 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC28A2O43868 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.29■■□□□ 1
SLC28A2O43868 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC28A2O43868 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC28A2O43868 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC28A2O43868 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.28■■□□□ 1
SLC28A2O43868 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.28■■□□□ 1
SLC28A2O43868 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.28■■□□□ 1
SLC28A2O43868 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.28■■□□□ 1
SLC28A2O43868 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.28■■□□□ 1
SLC28A2O43868 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.28■■□□□ 1
SLC28A2O43868 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.28■■□□□ 1
SLC28A2O43868 SNX5-217ENST00000606557 1087 ntBASIC21.28■■□□□ 1
SLC28A2O43868 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SLC28A2O43868 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SLC28A2O43868 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC28A2O43868 AC012676.1-201ENST00000574705 1949 ntBASIC21.27■■□□□ 1
SLC28A2O43868 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC28A2O43868 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC28A2O43868 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.27■■□□□ 1
SLC28A2O43868 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.27■■□□□ 1
SLC28A2O43868 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC28A2O43868 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SLC28A2O43868 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.27■■□□□ 1
SLC28A2O43868 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.27■■□□□ 1
SLC28A2O43868 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC28A2O43868 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC28A2O43868 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC28A2O43868 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC28A2O43868 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SLC28A2O43868 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SLC28A2O43868 AC131274.2-201ENST00000580697 1507 ntBASIC21.26■□□□□ 0.99
SLC28A2O43868 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC28A2O43868 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC28A2O43868 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.26■□□□□ 0.99
SLC28A2O43868 AC008764.7-201ENST00000593779 1081 ntBASIC21.26■□□□□ 0.99
SLC28A2O43868 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC28A2O43868 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC28A2O43868 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC28A2O43868 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC28A2O43868 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLC28A2O43868 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC28A2O43868 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC28A2O43868 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC28A2O43868 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC28A2O43868 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC28A2O43868 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SLC28A2O43868 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC28A2O43868 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC28A2O43868 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC28A2O43868 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SLC28A2O43868 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC28A2O43868 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC28A2O43868 ANOS2P-203ENST00000472227 1816 ntBASIC21.25■□□□□ 0.99
SLC28A2O43868 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC28A2O43868 AC004911.1-201ENST00000416316 871 ntBASIC21.24■□□□□ 0.99
SLC28A2O43868 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SLC28A2O43868 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC28A2O43868 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC28A2O43868 AC092171.4-201ENST00000609130 632 ntBASIC21.24■□□□□ 0.99
SLC28A2O43868 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC28A2O43868 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SLC28A2O43868 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC28A2O43868 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A2O43868 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A2O43868 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC28A2O43868 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SLC28A2O43868 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A2O43868 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC28A2O43868 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A2O43868 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SLC28A2O43868 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A2O43868 C9orf163-202ENST00000624034 2573 ntBASIC21.23■□□□□ 0.99
SLC28A2O43868 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A2O43868 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A2O43868 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC28A2O43868 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SLC28A2O43868 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SLC28A2O43868 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC28A2O43868 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC28A2O43868 KRT18P5-201ENST00000436075 1291 ntBASIC21.22■□□□□ 0.99
SLC28A2O43868 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.22■□□□□ 0.99
SLC28A2O43868 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC28A2O43868 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC28A2O43868 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms