Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-8O15522 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.72■□□□□ 0.91
NKX2-8O15522 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-8O15522 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-8O15522 HLA-L-209ENST00000420110 1011 ntBASIC20.72■□□□□ 0.91
NKX2-8O15522 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.72■□□□□ 0.91
NKX2-8O15522 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.72■□□□□ 0.91
NKX2-8O15522 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.72■□□□□ 0.91
NKX2-8O15522 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.72■□□□□ 0.91
NKX2-8O15522 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
NKX2-8O15522 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-8O15522 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-8O15522 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-8O15522 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NKX2-8O15522 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-8O15522 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.72■□□□□ 0.91
NKX2-8O15522 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKX2-8O15522 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.71■□□□□ 0.91
NKX2-8O15522 AP003733.4-201ENST00000623785 1697 ntBASIC20.71■□□□□ 0.91
NKX2-8O15522 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKX2-8O15522 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKX2-8O15522 LINC01529-204ENST00000636474 1715 ntBASIC20.71■□□□□ 0.91
NKX2-8O15522 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.71■□□□□ 0.91
NKX2-8O15522 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.71■□□□□ 0.91
NKX2-8O15522 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKX2-8O15522 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
NKX2-8O15522 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-8O15522 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-8O15522 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NKX2-8O15522 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.7■□□□□ 0.9
NKX2-8O15522 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-8O15522 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-8O15522 AC080038.1-201ENST00000611274 1154 ntBASIC20.7■□□□□ 0.9
NKX2-8O15522 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
NKX2-8O15522 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NKX2-8O15522 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-8O15522 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.69■□□□□ 0.9
NKX2-8O15522 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-8O15522 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NKX2-8O15522 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-8O15522 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-8O15522 KRT18P61-201ENST00000585825 1298 ntBASIC20.69■□□□□ 0.9
NKX2-8O15522 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-8O15522 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-8O15522 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.69■□□□□ 0.9
NKX2-8O15522 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-8O15522 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.69■□□□□ 0.9
NKX2-8O15522 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.69■□□□□ 0.9
NKX2-8O15522 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-8O15522 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-8O15522 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-8O15522 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.68■□□□□ 0.9
NKX2-8O15522 AC144652.1-201ENST00000609974 1624 ntBASIC20.68■□□□□ 0.9
NKX2-8O15522 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-8O15522 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.68■□□□□ 0.9
NKX2-8O15522 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NKX2-8O15522 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-8O15522 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.68■□□□□ 0.9
NKX2-8O15522 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-8O15522 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.68■□□□□ 0.9
NKX2-8O15522 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NKX2-8O15522 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.68■□□□□ 0.9
NKX2-8O15522 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NKX2-8O15522 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-8O15522 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-8O15522 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-8O15522 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.67■□□□□ 0.9
NKX2-8O15522 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.67■□□□□ 0.9
NKX2-8O15522 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.67■□□□□ 0.9
NKX2-8O15522 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-8O15522 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
NKX2-8O15522 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-8O15522 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.67■□□□□ 0.9
NKX2-8O15522 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NKX2-8O15522 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-8O15522 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-8O15522 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-8O15522 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.66■□□□□ 0.9
NKX2-8O15522 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.66■□□□□ 0.9
NKX2-8O15522 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-8O15522 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.66■□□□□ 0.9
NKX2-8O15522 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-8O15522 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-8O15522 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-8O15522 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.66■□□□□ 0.9
NKX2-8O15522 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.66■□□□□ 0.9
NKX2-8O15522 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-8O15522 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-8O15522 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-8O15522 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.66■□□□□ 0.9
NKX2-8O15522 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-8O15522 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-8O15522 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NKX2-8O15522 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-8O15522 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NKX2-8O15522 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-8O15522 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.65■□□□□ 0.9
NKX2-8O15522 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NKX2-8O15522 AC006015.1-201ENST00000429970 570 ntBASIC20.65■□□□□ 0.9
NKX2-8O15522 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms