Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SDHDO14521 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SDHDO14521 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SDHDO14521 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDHDO14521 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDHDO14521 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.52■■□□□ 1.04
SDHDO14521 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDHDO14521 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDHDO14521 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SDHDO14521 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SDHDO14521 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SDHDO14521 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SDHDO14521 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SDHDO14521 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.51■■□□□ 1.03
SDHDO14521 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SDHDO14521 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.51■■□□□ 1.03
SDHDO14521 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SDHDO14521 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.51■■□□□ 1.03
SDHDO14521 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SDHDO14521 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SDHDO14521 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SDHDO14521 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.5■■□□□ 1.03
SDHDO14521 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.5■■□□□ 1.03
SDHDO14521 AC144652.1-201ENST00000609974 1624 ntBASIC21.5■■□□□ 1.03
SDHDO14521 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SDHDO14521 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SDHDO14521 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SDHDO14521 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SDHDO14521 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SDHDO14521 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SDHDO14521 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.49■■□□□ 1.03
SDHDO14521 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SDHDO14521 BHLHE23-202ENST00000612929 1109 ntBASIC21.49■■□□□ 1.03
SDHDO14521 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SDHDO14521 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SDHDO14521 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.48■■□□□ 1.03
SDHDO14521 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 AL137060.1-201ENST00000618151 2648 ntBASIC21.48■■□□□ 1.03
SDHDO14521 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.48■■□□□ 1.03
SDHDO14521 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 NTF6A-201ENST00000591175 560 ntBASIC21.48■■□□□ 1.03
SDHDO14521 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.48■■□□□ 1.03
SDHDO14521 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SDHDO14521 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.48■■□□□ 1.03
SDHDO14521 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SDHDO14521 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SDHDO14521 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.47■■□□□ 1.03
SDHDO14521 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SDHDO14521 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SDHDO14521 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SDHDO14521 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SDHDO14521 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.46■■□□□ 1.03
SDHDO14521 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.46■■□□□ 1.03
SDHDO14521 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SDHDO14521 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.46■■□□□ 1.03
SDHDO14521 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.46■■□□□ 1.03
SDHDO14521 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SDHDO14521 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.46■■□□□ 1.03
SDHDO14521 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.46■■□□□ 1.03
SDHDO14521 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.46■■□□□ 1.03
SDHDO14521 AC074183.2-201ENST00000623112 922 ntBASIC21.46■■□□□ 1.03
SDHDO14521 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SDHDO14521 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SDHDO14521 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SDHDO14521 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SDHDO14521 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.45■■□□□ 1.02
SDHDO14521 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
SDHDO14521 ABHD17AP5-201ENST00000580133 923 ntBASIC21.45■■□□□ 1.02
SDHDO14521 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SDHDO14521 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SDHDO14521 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SDHDO14521 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SDHDO14521 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SDHDO14521 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SDHDO14521 AC004987.1-201ENST00000428627 508 ntBASIC21.44■■□□□ 1.02
SDHDO14521 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.44■■□□□ 1.02
SDHDO14521 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SDHDO14521 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SDHDO14521 FBXW4P1-201ENST00000426721 2239 ntBASIC21.44■■□□□ 1.02
SDHDO14521 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.43■■□□□ 1.02
SDHDO14521 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SDHDO14521 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SDHDO14521 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SDHDO14521 ATP5G2P3-201ENST00000429083 425 ntBASIC21.43■■□□□ 1.02
SDHDO14521 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.43■■□□□ 1.02
SDHDO14521 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SDHDO14521 AC010980.1-201ENST00000587192 1142 ntBASIC21.43■■□□□ 1.02
SDHDO14521 SNX5-217ENST00000606557 1087 ntBASIC21.43■■□□□ 1.02
SDHDO14521 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms