Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AC135731.1-201ENST00000569415 2548 ntBASIC19.76■□□□□ 0.75
CCL21O00585 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL21O00585 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCL21O00585 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.76■□□□□ 0.75
CCL21O00585 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL21O00585 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.76■□□□□ 0.75
CCL21O00585 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL21O00585 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.76■□□□□ 0.75
CCL21O00585 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.76■□□□□ 0.75
CCL21O00585 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL21O00585 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.76■□□□□ 0.75
CCL21O00585 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL21O00585 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.76■□□□□ 0.75
CCL21O00585 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL21O00585 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL21O00585 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CCL21O00585 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCL21O00585 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.75■□□□□ 0.75
CCL21O00585 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCL21O00585 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCL21O00585 AC137761.2-201ENST00000561729 223 ntBASIC19.75■□□□□ 0.75
CCL21O00585 AC145350.3-201ENST00000569033 163 ntBASIC19.75■□□□□ 0.75
CCL21O00585 LINC01529-204ENST00000636474 1715 ntBASIC19.75■□□□□ 0.75
CCL21O00585 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCL21O00585 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL21O00585 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.75■□□□□ 0.75
CCL21O00585 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL21O00585 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCL21O00585 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL21O00585 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCL21O00585 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCL21O00585 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL21O00585 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL21O00585 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.74■□□□□ 0.75
CCL21O00585 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL21O00585 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL21O00585 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL21O00585 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL21O00585 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCL21O00585 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.73■□□□□ 0.75
CCL21O00585 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.73■□□□□ 0.75
CCL21O00585 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.73■□□□□ 0.75
CCL21O00585 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.73■□□□□ 0.75
CCL21O00585 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
CCL21O00585 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCL21O00585 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCL21O00585 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL21O00585 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL21O00585 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL21O00585 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.72■□□□□ 0.75
CCL21O00585 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.72■□□□□ 0.75
CCL21O00585 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.72■□□□□ 0.75
CCL21O00585 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.72■□□□□ 0.75
CCL21O00585 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL21O00585 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCL21O00585 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCL21O00585 AC144652.1-201ENST00000609974 1624 ntBASIC19.72■□□□□ 0.75
CCL21O00585 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCL21O00585 AP003733.4-201ENST00000623785 1697 ntBASIC19.71■□□□□ 0.75
CCL21O00585 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCL21O00585 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL21O00585 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCL21O00585 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL21O00585 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCL21O00585 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.71■□□□□ 0.75
CCL21O00585 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.71■□□□□ 0.75
CCL21O00585 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.71■□□□□ 0.75
CCL21O00585 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.71■□□□□ 0.75
CCL21O00585 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCL21O00585 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL21O00585 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.71■□□□□ 0.75
CCL21O00585 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL21O00585 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL21O00585 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL21O00585 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.7■□□□□ 0.74
CCL21O00585 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL21O00585 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL21O00585 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.7■□□□□ 0.74
CCL21O00585 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL21O00585 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.7■□□□□ 0.74
CCL21O00585 AC006015.1-201ENST00000429970 570 ntBASIC19.7■□□□□ 0.74
CCL21O00585 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.7■□□□□ 0.74
CCL21O00585 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.7■□□□□ 0.74
CCL21O00585 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.7■□□□□ 0.74
CCL21O00585 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.7■□□□□ 0.74
CCL21O00585 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.7■□□□□ 0.74
CCL21O00585 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCL21O00585 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.7■□□□□ 0.74
CCL21O00585 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCL21O00585 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL21O00585 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.69■□□□□ 0.74
CCL21O00585 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCL21O00585 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL21O00585 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.69■□□□□ 0.74
CCL21O00585 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCL21O00585 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL21O00585 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.69■□□□□ 0.74
CCL21O00585 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCL21O00585 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL21O00585 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms