Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PITPNM1O00562 HLA-L-209ENST00000420110 1011 ntBASIC24.46■■□□□ 1.51
PITPNM1O00562 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PITPNM1O00562 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.46■■□□□ 1.51
PITPNM1O00562 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
PITPNM1O00562 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PITPNM1O00562 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PITPNM1O00562 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PITPNM1O00562 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.45■■□□□ 1.5
PITPNM1O00562 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.45■■□□□ 1.5
PITPNM1O00562 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PITPNM1O00562 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PITPNM1O00562 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PITPNM1O00562 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PITPNM1O00562 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PITPNM1O00562 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PITPNM1O00562 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.44■■□□□ 1.5
PITPNM1O00562 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.44■■□□□ 1.5
PITPNM1O00562 AC080038.1-201ENST00000611274 1154 ntBASIC24.44■■□□□ 1.5
PITPNM1O00562 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
PITPNM1O00562 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PITPNM1O00562 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PITPNM1O00562 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.43■■□□□ 1.5
PITPNM1O00562 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.43■■□□□ 1.5
PITPNM1O00562 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PITPNM1O00562 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PITPNM1O00562 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.42■■□□□ 1.5
PITPNM1O00562 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.42■■□□□ 1.5
PITPNM1O00562 KRT18P61-201ENST00000585825 1298 ntBASIC24.42■■□□□ 1.5
PITPNM1O00562 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.42■■□□□ 1.5
PITPNM1O00562 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PITPNM1O00562 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PITPNM1O00562 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PITPNM1O00562 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.42■■□□□ 1.5
PITPNM1O00562 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PITPNM1O00562 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.42■■□□□ 1.5
PITPNM1O00562 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PITPNM1O00562 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PITPNM1O00562 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PITPNM1O00562 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PITPNM1O00562 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PITPNM1O00562 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.41■■□□□ 1.5
PITPNM1O00562 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.41■■□□□ 1.5
PITPNM1O00562 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.41■■□□□ 1.5
PITPNM1O00562 TPRG1LP1-201ENST00000598702 760 ntBASIC24.41■■□□□ 1.5
PITPNM1O00562 RAP2CP1-201ENST00000605103 478 ntBASIC24.41■■□□□ 1.5
PITPNM1O00562 Z99916.3-201ENST00000623422 1080 ntBASIC24.41■■□□□ 1.5
PITPNM1O00562 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PITPNM1O00562 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.41■■□□□ 1.5
PITPNM1O00562 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
PITPNM1O00562 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PITPNM1O00562 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.4■■□□□ 1.5
PITPNM1O00562 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PITPNM1O00562 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.4■■□□□ 1.5
PITPNM1O00562 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PITPNM1O00562 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.4■■□□□ 1.5
PITPNM1O00562 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PITPNM1O00562 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.4■■□□□ 1.5
PITPNM1O00562 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.4■■□□□ 1.5
PITPNM1O00562 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.4■■□□□ 1.5
PITPNM1O00562 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PITPNM1O00562 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PITPNM1O00562 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.4■■□□□ 1.5
PITPNM1O00562 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PITPNM1O00562 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PITPNM1O00562 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PITPNM1O00562 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PITPNM1O00562 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
PITPNM1O00562 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PITPNM1O00562 AC022211.4-201ENST00000625094 2161 ntBASIC24.39■■□□□ 1.5
PITPNM1O00562 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PITPNM1O00562 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.39■■□□□ 1.5
PITPNM1O00562 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.39■■□□□ 1.49
PITPNM1O00562 AC135731.1-201ENST00000569415 2548 ntBASIC24.39■■□□□ 1.49
PITPNM1O00562 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PITPNM1O00562 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.39■■□□□ 1.49
PITPNM1O00562 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PITPNM1O00562 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
PITPNM1O00562 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PITPNM1O00562 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PITPNM1O00562 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.38■■□□□ 1.49
PITPNM1O00562 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PITPNM1O00562 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
PITPNM1O00562 AC016769.1-201ENST00000409132 1010 ntBASIC24.38■■□□□ 1.49
PITPNM1O00562 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PITPNM1O00562 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.38■■□□□ 1.49
PITPNM1O00562 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.38■■□□□ 1.49
PITPNM1O00562 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.38■■□□□ 1.49
PITPNM1O00562 AC137761.2-201ENST00000561729 223 ntBASIC24.38■■□□□ 1.49
PITPNM1O00562 AC145350.3-201ENST00000569033 163 ntBASIC24.38■■□□□ 1.49
PITPNM1O00562 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.38■■□□□ 1.49
PITPNM1O00562 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PITPNM1O00562 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PITPNM1O00562 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PITPNM1O00562 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PITPNM1O00562 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PITPNM1O00562 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PITPNM1O00562 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
PITPNM1O00562 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.37■■□□□ 1.49
PITPNM1O00562 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms