Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 AC233723.2-201ENST00000623798 2106 ntBASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHKB-CPT1BH3BT56 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 FOXO3B-201ENST00000395675 1928 ntBASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHKB-CPT1BH3BT56 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CHKB-CPT1BH3BT56 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHKB-CPT1BH3BT56 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHKB-CPT1BH3BT56 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHKB-CPT1BH3BT56 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHKB-CPT1BH3BT56 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHKB-CPT1BH3BT56 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHKB-CPT1BH3BT56 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHKB-CPT1BH3BT56 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHKB-CPT1BH3BT56 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHKB-CPT1BH3BT56 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CHKB-CPT1BH3BT56 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHKB-CPT1BH3BT56 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CHKB-CPT1BH3BT56 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CHKB-CPT1BH3BT56 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHKB-CPT1BH3BT56 GALC-202ENST00000393568 2054 ntTSL 2 BASIC12.46□□□□□ -0.42
CHKB-CPT1BH3BT56 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 WHAMMP2-203ENST00000563942 1603 ntBASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 EED-207ENST00000528180 1745 ntTSL 5 BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHKB-CPT1BH3BT56 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHKB-CPT1BH3BT56 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 AC127496.7-201ENST00000625110 1798 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms