Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC01548A6NM66 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01548A6NM66 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LINC01548A6NM66 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01548A6NM66 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01548A6NM66 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.56■□□□□ 0.4
LINC01548A6NM66 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01548A6NM66 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01548A6NM66 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01548A6NM66 MIR4767-201ENST00000582827 78 ntBASIC17.56■□□□□ 0.4
LINC01548A6NM66 AL499627.2-201ENST00000606283 725 ntBASIC17.56■□□□□ 0.4
LINC01548A6NM66 AC005837.3-201ENST00000612163 286 ntBASIC17.56■□□□□ 0.4
LINC01548A6NM66 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
LINC01548A6NM66 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01548A6NM66 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01548A6NM66 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC01548A6NM66 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LINC01548A6NM66 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LINC01548A6NM66 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
LINC01548A6NM66 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.55■□□□□ 0.4
LINC01548A6NM66 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01548A6NM66 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC01548A6NM66 AL138724.1-201ENST00000606771 1088 ntBASIC17.55■□□□□ 0.4
LINC01548A6NM66 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LINC01548A6NM66 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01548A6NM66 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01548A6NM66 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01548A6NM66 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01548A6NM66 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01548A6NM66 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01548A6NM66 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LINC01548A6NM66 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01548A6NM66 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.54■□□□□ 0.4
LINC01548A6NM66 AC133637.1-201ENST00000624115 1537 ntBASIC17.54■□□□□ 0.4
LINC01548A6NM66 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.54■□□□□ 0.4
LINC01548A6NM66 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01548A6NM66 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01548A6NM66 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01548A6NM66 AL031432.3-201ENST00000607698 485 ntBASIC17.54■□□□□ 0.4
LINC01548A6NM66 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01548A6NM66 AC011298.3-201ENST00000615796 283 ntBASIC17.54■□□□□ 0.4
LINC01548A6NM66 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01548A6NM66 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01548A6NM66 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LINC01548A6NM66 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01548A6NM66 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01548A6NM66 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.53■□□□□ 0.4
LINC01548A6NM66 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
LINC01548A6NM66 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.53■□□□□ 0.4
LINC01548A6NM66 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LINC01548A6NM66 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.53■□□□□ 0.4
LINC01548A6NM66 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01548A6NM66 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01548A6NM66 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01548A6NM66 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.52■□□□□ 0.4
LINC01548A6NM66 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01548A6NM66 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01548A6NM66 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
LINC01548A6NM66 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01548A6NM66 AC133561.4-201ENST00000566112 224 ntBASIC17.52■□□□□ 0.4
LINC01548A6NM66 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.52■□□□□ 0.4
LINC01548A6NM66 AC136469.2-201ENST00000623944 1028 ntBASIC17.52■□□□□ 0.4
LINC01548A6NM66 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
LINC01548A6NM66 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01548A6NM66 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
LINC01548A6NM66 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01548A6NM66 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.52■□□□□ 0.39
LINC01548A6NM66 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.52■□□□□ 0.39
LINC01548A6NM66 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.52■□□□□ 0.39
LINC01548A6NM66 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01548A6NM66 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01548A6NM66 C9orf163-202ENST00000624034 2573 ntBASIC17.51■□□□□ 0.39
LINC01548A6NM66 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
LINC01548A6NM66 AC004687.1-201ENST00000579003 1625 ntBASIC17.51■□□□□ 0.39
LINC01548A6NM66 DUSP8P3-201ENST00000399571 1760 ntBASIC17.51■□□□□ 0.39
LINC01548A6NM66 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms