Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.76■□□□□ 0.75
NKX2-6A6NCS4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 IGHV3-19-201ENST00000521488 291 ntBASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 AL358852.1-201ENST00000623174 1268 ntBASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-6A6NCS4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-6A6NCS4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.74■□□□□ 0.75
NKX2-6A6NCS4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-6A6NCS4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.74■□□□□ 0.75
NKX2-6A6NCS4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-6A6NCS4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-6A6NCS4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-6A6NCS4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-6A6NCS4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.74■□□□□ 0.75
NKX2-6A6NCS4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NKX2-6A6NCS4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
NKX2-6A6NCS4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 AC027612.3-201ENST00000413684 1047 ntBASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 AC012414.1-201ENST00000556676 535 ntBASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 AC092437.1-201ENST00000624794 1048 ntBASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-6A6NCS4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 AC133637.1-201ENST00000624115 1537 ntBASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 MIR572-201ENST00000384983 95 ntBASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 AC004911.1-201ENST00000416316 871 ntBASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX2-6A6NCS4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.71■□□□□ 0.75
NKX2-6A6NCS4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NKX2-6A6NCS4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX2-6A6NCS4 AC123595.1-201ENST00000440769 1046 ntBASIC19.7■□□□□ 0.74
NKX2-6A6NCS4 AC010525.1-201ENST00000585559 441 ntBASIC19.7■□□□□ 0.74
NKX2-6A6NCS4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NKX2-6A6NCS4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-6A6NCS4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NKX2-6A6NCS4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-6A6NCS4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 CCDC92B-201ENST00000575506 885 ntBASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms