Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.56■□□□□ 0.88
SH3D21A4FU49 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3D21A4FU49 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.56■□□□□ 0.88
SH3D21A4FU49 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH3D21A4FU49 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SH3D21A4FU49 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.56■□□□□ 0.88
SH3D21A4FU49 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.56■□□□□ 0.88
SH3D21A4FU49 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SH3D21A4FU49 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3D21A4FU49 ESRRAP2-201ENST00000418437 1549 ntBASIC20.55■□□□□ 0.88
SH3D21A4FU49 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH3D21A4FU49 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.55■□□□□ 0.88
SH3D21A4FU49 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3D21A4FU49 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3D21A4FU49 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3D21A4FU49 AC242852.2-201ENST00000615738 1807 ntBASIC20.55■□□□□ 0.88
SH3D21A4FU49 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3D21A4FU49 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.55■□□□□ 0.88
SH3D21A4FU49 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3D21A4FU49 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3D21A4FU49 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3D21A4FU49 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3D21A4FU49 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3D21A4FU49 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SH3D21A4FU49 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3D21A4FU49 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3D21A4FU49 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SH3D21A4FU49 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3D21A4FU49 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.54■□□□□ 0.88
SH3D21A4FU49 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3D21A4FU49 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3D21A4FU49 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SH3D21A4FU49 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3D21A4FU49 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3D21A4FU49 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3D21A4FU49 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3D21A4FU49 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SH3D21A4FU49 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3D21A4FU49 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.53■□□□□ 0.88
SH3D21A4FU49 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.53■□□□□ 0.88
SH3D21A4FU49 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3D21A4FU49 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3D21A4FU49 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3D21A4FU49 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.53■□□□□ 0.88
SH3D21A4FU49 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.53■□□□□ 0.88
SH3D21A4FU49 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.53■□□□□ 0.88
SH3D21A4FU49 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.53■□□□□ 0.88
SH3D21A4FU49 MIR6724-1-201ENST00000616420 92 ntBASIC20.53■□□□□ 0.88
SH3D21A4FU49 MIR6724-2-201ENST00000616483 92 ntBASIC20.53■□□□□ 0.88
SH3D21A4FU49 MIR6724-4-201ENST00000617390 92 ntBASIC20.53■□□□□ 0.88
SH3D21A4FU49 MIR6724-3-201ENST00000622482 92 ntBASIC20.53■□□□□ 0.88
SH3D21A4FU49 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
SH3D21A4FU49 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3D21A4FU49 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH3D21A4FU49 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.53■□□□□ 0.88
SH3D21A4FU49 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3D21A4FU49 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SH3D21A4FU49 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SH3D21A4FU49 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3D21A4FU49 AC131281.2-201ENST00000520478 145 ntBASIC20.52■□□□□ 0.88
SH3D21A4FU49 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.52■□□□□ 0.88
SH3D21A4FU49 AL117332.1-201ENST00000622628 974 ntBASIC20.52■□□□□ 0.88
SH3D21A4FU49 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3D21A4FU49 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3D21A4FU49 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SH3D21A4FU49 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SH3D21A4FU49 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH3D21A4FU49 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SH3D21A4FU49 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH3D21A4FU49 AC090877.2-201ENST00000558441 1738 ntBASIC20.51■□□□□ 0.87
SH3D21A4FU49 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.51■□□□□ 0.87
SH3D21A4FU49 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SH3D21A4FU49 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SH3D21A4FU49 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.51■□□□□ 0.87
SH3D21A4FU49 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH3D21A4FU49 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3D21A4FU49 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3D21A4FU49 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3D21A4FU49 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.5■□□□□ 0.87
SH3D21A4FU49 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.5■□□□□ 0.87
SH3D21A4FU49 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.5■□□□□ 0.87
SH3D21A4FU49 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.5■□□□□ 0.87
SH3D21A4FU49 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3D21A4FU49 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.49■□□□□ 0.87
SH3D21A4FU49 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.49■□□□□ 0.87
SH3D21A4FU49 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SH3D21A4FU49 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SH3D21A4FU49 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3D21A4FU49 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SH3D21A4FU49 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SH3D21A4FU49 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SH3D21A4FU49 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.49■□□□□ 0.87
SH3D21A4FU49 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3D21A4FU49 AL356740.2-201ENST00000601559 647 ntBASIC20.49■□□□□ 0.87
SH3D21A4FU49 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.49■□□□□ 0.87
SH3D21A4FU49 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3D21A4FU49 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
SH3D21A4FU49 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SH3D21A4FU49 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
SH3D21A4FU49 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms