Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA3A0PJX4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SHISA3A0PJX4 AC010542.4-201ENST00000563151 1910 ntBASIC19.45■□□□□ 0.7
SHISA3A0PJX4 AC073130.3-201ENST00000624389 2278 ntBASIC19.45■□□□□ 0.7
SHISA3A0PJX4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.45■□□□□ 0.7
SHISA3A0PJX4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA3A0PJX4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.45■□□□□ 0.7
SHISA3A0PJX4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA3A0PJX4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SHISA3A0PJX4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA3A0PJX4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SHISA3A0PJX4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA3A0PJX4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA3A0PJX4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA3A0PJX4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SHISA3A0PJX4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA3A0PJX4 MIR639-201ENST00000384974 98 ntBASIC19.44■□□□□ 0.7
SHISA3A0PJX4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA3A0PJX4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.44■□□□□ 0.7
SHISA3A0PJX4 AC005229.4-201ENST00000610085 2198 ntBASIC19.44■□□□□ 0.7
SHISA3A0PJX4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA3A0PJX4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.44■□□□□ 0.7
SHISA3A0PJX4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA3A0PJX4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA3A0PJX4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA3A0PJX4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.44■□□□□ 0.7
SHISA3A0PJX4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA3A0PJX4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SHISA3A0PJX4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.43■□□□□ 0.7
SHISA3A0PJX4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.43■□□□□ 0.7
SHISA3A0PJX4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SHISA3A0PJX4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.43■□□□□ 0.7
SHISA3A0PJX4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SHISA3A0PJX4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA3A0PJX4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SHISA3A0PJX4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA3A0PJX4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.42■□□□□ 0.7
SHISA3A0PJX4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHISA3A0PJX4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHISA3A0PJX4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHISA3A0PJX4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHISA3A0PJX4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHISA3A0PJX4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHISA3A0PJX4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHISA3A0PJX4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.41■□□□□ 0.7
SHISA3A0PJX4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SHISA3A0PJX4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 AC018755.3-202ENST00000596210 929 ntBASIC19.4■□□□□ 0.7
SHISA3A0PJX4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.4■□□□□ 0.7
SHISA3A0PJX4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHISA3A0PJX4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.39■□□□□ 0.7
SHISA3A0PJX4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SHISA3A0PJX4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHISA3A0PJX4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHISA3A0PJX4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.39■□□□□ 0.69
SHISA3A0PJX4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SHISA3A0PJX4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.39■□□□□ 0.69
SHISA3A0PJX4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.39■□□□□ 0.69
SHISA3A0PJX4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.39■□□□□ 0.69
SHISA3A0PJX4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SHISA3A0PJX4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.38■□□□□ 0.69
SHISA3A0PJX4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHISA3A0PJX4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHISA3A0PJX4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHISA3A0PJX4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.38■□□□□ 0.69
SHISA3A0PJX4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SHISA3A0PJX4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHISA3A0PJX4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHISA3A0PJX4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.38■□□□□ 0.69
SHISA3A0PJX4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHISA3A0PJX4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms