Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-4A0A1B0GX49 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-4A0A1B0GX49 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-4A0A1B0GX49 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-4A0A1B0GX49 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-4A0A1B0GX49 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.67■□□□□ 0.1
TRBV6-4A0A1B0GX49 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-4A0A1B0GX49 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-4A0A1B0GX49 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 AC079834.2-201ENST00000609776 1949 ntBASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-4A0A1B0GX49 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-4A0A1B0GX49 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 UNC93B8-201ENST00000511903 705 ntBASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 AL035685.1-201ENST00000636663 812 ntBASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-4A0A1B0GX49 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 C17orf82-201ENST00000623772 1530 ntBASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-4A0A1B0GX49 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 KRT16P3-201ENST00000439127 1283 ntBASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms