Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 AC144652.1-201ENST00000609974 1624 ntBASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 AC103834.1-201ENST00000520383 144 ntBASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 AL033527.3-201ENST00000566366 1196 ntBASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00959A0A1B0GUT2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 KRT8P33-201ENST00000508125 1423 ntBASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 AC103724.3-201ENST00000564481 992 ntBASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00959A0A1B0GUT2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 AC137630.3-201ENST00000607245 391 ntBASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LINC00959A0A1B0GUT2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00959A0A1B0GUT2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00959A0A1B0GUT2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms