Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV22A0A0B4J277 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 RARG-204ENST00000543726 1779 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV22A0A0B4J277 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 C11orf96-202ENST00000528572 1834 ntBASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 MIR762-201ENST00000390236 83 ntBASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 MIR6090-201ENST00000622481 60 ntBASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRAV22A0A0B4J277 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 AL359504.2-201ENST00000605506 1601 ntBASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 AC026310.3-201ENST00000625186 2373 ntBASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV22A0A0B4J277 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TRAV22A0A0B4J277 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
TRAV22A0A0B4J277 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRAV22A0A0B4J277 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC12.58□□□□□ -0.39
TRAV22A0A0B4J277 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRAV22A0A0B4J277 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC12.58□□□□□ -0.39
TRAV22A0A0B4J277 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
TRAV22A0A0B4J277 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 AC092053.2-201ENST00000640557 1818 ntBASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 RARRES2P7-201ENST00000567349 469 ntBASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms