Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 SERBP1P1-201ENST00000396021 1160 ntBASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 AP001330.3-201ENST00000520123 633 ntBASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 MIR4767-201ENST00000582827 78 ntBASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 AC105265.2-201ENST00000467189 838 ntBASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 RARRES2P6-201ENST00000567333 442 ntBASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 C17orf82-201ENST00000623772 1530 ntBASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRAV20A0A0B4J274 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV20A0A0B4J274 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 AC027682.1-201ENST00000562846 899 ntBASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV20A0A0B4J274 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV20A0A0B4J274 RASA4CP-201ENST00000424092 1398 ntBASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms