Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 AL358852.1-201ENST00000623174 1268 ntBASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRAV19A0A0A6YYK7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRAV19A0A0A6YYK7 MIR572-201ENST00000384983 95 ntBASIC23.11■■□□□ 1.29
TRAV19A0A0A6YYK7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.1■■□□□ 1.29
TRAV19A0A0A6YYK7 AL162430.1-201ENST00000480705 870 ntBASIC23.1■■□□□ 1.29
TRAV19A0A0A6YYK7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRAV19A0A0A6YYK7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.1■■□□□ 1.29
TRAV19A0A0A6YYK7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRAV19A0A0A6YYK7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.1■■□□□ 1.29
TRAV19A0A0A6YYK7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRAV19A0A0A6YYK7 AC079630.1-202ENST00000618127 1840 ntBASIC23.1■■□□□ 1.29
TRAV19A0A0A6YYK7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV19A0A0A6YYK7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV19A0A0A6YYK7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV19A0A0A6YYK7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV19A0A0A6YYK7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV19A0A0A6YYK7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV19A0A0A6YYK7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.09■■□□□ 1.29
TRAV19A0A0A6YYK7 AP005435.1-201ENST00000529293 1178 ntBASIC23.09■■□□□ 1.29
TRAV19A0A0A6YYK7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV19A0A0A6YYK7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV19A0A0A6YYK7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.09■■□□□ 1.29
TRAV19A0A0A6YYK7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRAV19A0A0A6YYK7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRAV19A0A0A6YYK7 YBX1P1-201ENST00000445822 960 ntBASIC23.08■■□□□ 1.29
TRAV19A0A0A6YYK7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.08■■□□□ 1.29
TRAV19A0A0A6YYK7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRAV19A0A0A6YYK7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRAV19A0A0A6YYK7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.07■■□□□ 1.28
TRAV19A0A0A6YYK7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAV19A0A0A6YYK7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.07■■□□□ 1.28
TRAV19A0A0A6YYK7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.07■■□□□ 1.28
TRAV19A0A0A6YYK7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.07■■□□□ 1.28
TRAV19A0A0A6YYK7 AC012414.1-201ENST00000556676 535 ntBASIC23.07■■□□□ 1.28
TRAV19A0A0A6YYK7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRAV19A0A0A6YYK7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.07■■□□□ 1.28
TRAV19A0A0A6YYK7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAV19A0A0A6YYK7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAV19A0A0A6YYK7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
TRAV19A0A0A6YYK7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 AL354811.1-201ENST00000610286 706 ntBASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 ABCB10P4-201ENST00000566803 2184 ntBASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV19A0A0A6YYK7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.05■■□□□ 1.28
TRAV19A0A0A6YYK7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRAV19A0A0A6YYK7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAV19A0A0A6YYK7 AC027612.3-201ENST00000413684 1047 ntBASIC23.05■■□□□ 1.28
TRAV19A0A0A6YYK7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.05■■□□□ 1.28
TRAV19A0A0A6YYK7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRAV19A0A0A6YYK7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TRAV19A0A0A6YYK7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV19A0A0A6YYK7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV19A0A0A6YYK7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV19A0A0A6YYK7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV19A0A0A6YYK7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.04■■□□□ 1.28
TRAV19A0A0A6YYK7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.04■■□□□ 1.28
TRAV19A0A0A6YYK7 AC034268.1-201ENST00000441047 882 ntBASIC23.04■■□□□ 1.28
TRAV19A0A0A6YYK7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV19A0A0A6YYK7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV19A0A0A6YYK7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV19A0A0A6YYK7 MIR6084-201ENST00000622012 110 ntBASIC23.04■■□□□ 1.28
TRAV19A0A0A6YYK7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV19A0A0A6YYK7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV19A0A0A6YYK7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.03■■□□□ 1.28
TRAV19A0A0A6YYK7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TRAV19A0A0A6YYK7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
TRAV19A0A0A6YYK7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV19A0A0A6YYK7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV19A0A0A6YYK7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
TRAV19A0A0A6YYK7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.02■■□□□ 1.28
TRAV19A0A0A6YYK7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRAV19A0A0A6YYK7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
TRAV19A0A0A6YYK7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRAV19A0A0A6YYK7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
TRAV19A0A0A6YYK7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.02■■□□□ 1.28
TRAV19A0A0A6YYK7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.02■■□□□ 1.28
TRAV19A0A0A6YYK7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms