Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 AC080038.3-201ENST00000623346 1952 ntBASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 DUX4L13-201ENST00000554103 1267 ntBASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 DUX4L15-201ENST00000611059 1267 ntBASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 DUX4L23-201ENST00000615195 1269 ntBASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 DUX4L24-201ENST00000617576 1269 ntBASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 DUX4L22-201ENST00000618238 1269 ntBASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 DUX4L20-201ENST00000619712 1269 ntBASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 DUX4L21-201ENST00000622058 1269 ntBASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 DUX4L10-201ENST00000622460 1267 ntBASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 DUX4L25-201ENST00000624915 1269 ntBASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRAV6A0A075B6T7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV6A0A075B6T7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRAV6A0A075B6T7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19■□□□□ 0.63
TRAV6A0A075B6T7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV6A0A075B6T7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV6A0A075B6T7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV6A0A075B6T7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV6A0A075B6T7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRAV6A0A075B6T7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV6A0A075B6T7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV6A0A075B6T7 FAM99A-202ENST00000538190 1989 ntBASIC19■□□□□ 0.63
TRAV6A0A075B6T7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV6A0A075B6T7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV6A0A075B6T7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 AP006261.1-201ENST00000584783 668 ntBASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV6A0A075B6T7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV6A0A075B6T7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV6A0A075B6T7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV6A0A075B6T7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV6A0A075B6T7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV6A0A075B6T7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV6A0A075B6T7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.97■□□□□ 0.63
TRAV6A0A075B6T7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV6A0A075B6T7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV6A0A075B6T7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV6A0A075B6T7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV6A0A075B6T7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms