Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKAL1Q5VV42 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKAL1Q5VV42 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKAL1Q5VV42 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKAL1Q5VV42 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKAL1Q5VV42 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 AC025186.1-201ENST00000478174 870 ntBASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 RN7SL564P-201ENST00000496309 250 ntBASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 HIST2H2BC-201ENST00000498492 580 ntBASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 AC024681.1-201ENST00000521917 487 ntBASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 KRT8P2-201ENST00000556193 944 ntBASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 AC242376.1-201ENST00000559033 726 ntBASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 KRT8P42-201ENST00000405771 1399 ntBASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 CA6-205ENST00000480186 1493 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKAL1Q5VV42 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 RN7SKP102-201ENST00000411186 315 ntBASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 OR52M2P-201ENST00000414298 959 ntBASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 DTX2P1-201ENST00000425797 1633 ntBASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 AL512306.1-201ENST00000432698 848 ntBASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 RN7SL67P-201ENST00000492147 296 ntBASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 SCARNA20.5-201ENST00000516991 142 ntBASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 AL132994.1-201ENST00000554098 400 ntBASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 NDUFV2P1-201ENST00000596415 907 ntBASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 AL009176.1-201ENST00000607876 650 ntBASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKAL1Q5VV42 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKAL1Q5VV42 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
CDKAL1Q5VV42 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC14.78□□□□□ -0.04
CDKAL1Q5VV42 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC14.78□□□□□ -0.04
CDKAL1Q5VV42 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKAL1Q5VV42 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms