Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM2P07951 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM2P07951 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM2P07951 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.59■□□□□ 0.09
TPM2P07951 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TPM2P07951 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM2P07951 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM2P07951 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM2P07951 AL358781.1-202ENST00000321081 1360 ntBASIC15.59■□□□□ 0.09
TPM2P07951 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.59■□□□□ 0.09
TPM2P07951 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.59■□□□□ 0.09
TPM2P07951 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM2P07951 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM2P07951 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM2P07951 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM2P07951 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TPM2P07951 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
TPM2P07951 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TPM2P07951 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TPM2P07951 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC15.58■□□□□ 0.09
TPM2P07951 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TPM2P07951 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TPM2P07951 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 HK2P1-201ENST00000447818 2737 ntBASIC15.58■□□□□ 0.08
TPM2P07951 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM2P07951 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM2P07951 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.58■□□□□ 0.08
TPM2P07951 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 GOLGA2P8-201ENST00000505201 779 ntBASIC15.58■□□□□ 0.08
TPM2P07951 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM2P07951 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TPM2P07951 AC003686.1-201ENST00000550956 1034 ntBASIC15.58■□□□□ 0.08
TPM2P07951 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM2P07951 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.58■□□□□ 0.08
TPM2P07951 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM2P07951 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TPM2P07951 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TPM2P07951 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM2P07951 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM2P07951 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM2P07951 MICA-210ENST00000616296 2260 ntTSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM2P07951 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM2P07951 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM2P07951 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM2P07951 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.57■□□□□ 0.08
TPM2P07951 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.57■□□□□ 0.08
TPM2P07951 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TPM2P07951 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 AP005018.1-201ENST00000525475 301 ntBASIC15.57■□□□□ 0.08
TPM2P07951 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.57■□□□□ 0.08
TPM2P07951 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM2P07951 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 AL139158.3-201ENST00000641212 1562 ntBASIC15.57■□□□□ 0.08
TPM2P07951 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC15.57■□□□□ 0.08
TPM2P07951 AC026797.1-201ENST00000624837 2869 ntBASIC15.57■□□□□ 0.08
TPM2P07951 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM2P07951 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM2P07951 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms