Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHL1O00533 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CHL1O00533 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CHL1O00533 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHL1O00533 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CHL1O00533 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC17.21■□□□□ 0.35
CHL1O00533 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHL1O00533 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CHL1O00533 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.21■□□□□ 0.35
CHL1O00533 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.21■□□□□ 0.35
CHL1O00533 RPSAP6-201ENST00000417882 882 ntBASIC17.21■□□□□ 0.35
CHL1O00533 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC17.21■□□□□ 0.35
CHL1O00533 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHL1O00533 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHL1O00533 RPS15P5-201ENST00000449885 432 ntBASIC17.21■□□□□ 0.35
CHL1O00533 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CHL1O00533 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC17.21■□□□□ 0.35
CHL1O00533 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC17.21■□□□□ 0.35
CHL1O00533 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC17.21■□□□□ 0.35
CHL1O00533 AC012146.4-201ENST00000575546 271 ntBASIC17.21■□□□□ 0.35
CHL1O00533 CCND3P2-201ENST00000579393 537 ntBASIC17.21■□□□□ 0.35
CHL1O00533 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC17.21■□□□□ 0.35
CHL1O00533 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC17.21■□□□□ 0.35
CHL1O00533 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHL1O00533 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHL1O00533 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHL1O00533 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHL1O00533 AC004241.5-201ENST00000623870 2448 ntBASIC17.21■□□□□ 0.35
CHL1O00533 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHL1O00533 AC010970.1-201ENST00000445125 1848 ntBASIC17.21■□□□□ 0.35
CHL1O00533 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC17.21■□□□□ 0.35
CHL1O00533 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC17.21■□□□□ 0.34
CHL1O00533 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHL1O00533 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CHL1O00533 AC139491.6-202ENST00000637171 2077 ntBASIC17.2■□□□□ 0.34
CHL1O00533 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
CHL1O00533 AC114271.1-201ENST00000612689 2813 ntBASIC17.2■□□□□ 0.34
CHL1O00533 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHL1O00533 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHL1O00533 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.2■□□□□ 0.34
CHL1O00533 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CHL1O00533 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 MIR632-201ENST00000385193 94 ntBASIC17.2■□□□□ 0.34
CHL1O00533 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.2■□□□□ 0.34
CHL1O00533 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC17.2■□□□□ 0.34
CHL1O00533 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.2■□□□□ 0.34
CHL1O00533 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.2■□□□□ 0.34
CHL1O00533 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC17.2■□□□□ 0.34
CHL1O00533 HNRNPA3P6-201ENST00000472163 1006 ntBASIC17.2■□□□□ 0.34
CHL1O00533 VTI1BP1-201ENST00000486325 700 ntBASIC17.2■□□□□ 0.34
CHL1O00533 IGHVII-74-1-201ENST00000517572 241 ntBASIC17.2■□□□□ 0.34
CHL1O00533 IGHEP2-201ENST00000519308 1256 ntBASIC17.2■□□□□ 0.34
CHL1O00533 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 PLS3-210ENST00000626746 216 ntTSL 4 BASIC17.2■□□□□ 0.34
CHL1O00533 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHL1O00533 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHL1O00533 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CHL1O00533 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC17.2■□□□□ 0.34
CHL1O00533 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC17.2■□□□□ 0.34
CHL1O00533 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHL1O00533 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.2■□□□□ 0.34
CHL1O00533 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CHL1O00533 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC17.2■□□□□ 0.34
CHL1O00533 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHL1O00533 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHL1O00533 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHL1O00533 DDX12P-201ENST00000432996 2947 ntBASIC17.19■□□□□ 0.34
CHL1O00533 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC17.19■□□□□ 0.34
CHL1O00533 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC17.19■□□□□ 0.34
CHL1O00533 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHL1O00533 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 MIR324-201ENST00000362183 83 ntBASIC17.19■□□□□ 0.34
CHL1O00533 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC17.19■□□□□ 0.34
CHL1O00533 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC17.19■□□□□ 0.34
CHL1O00533 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 AC244097.1-201ENST00000621631 1216 ntBASIC17.19■□□□□ 0.34
CHL1O00533 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.19■□□□□ 0.34
CHL1O00533 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHL1O00533 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC17.19■□□□□ 0.34
CHL1O00533 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms