Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 RNA5SP406-201ENST00000516106 112 ntBASIC11.99□□□□□ -0.49
NPIPB4C9JG80 NEU3-207ENST00000534628 746 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 VENTXP3-201ENST00000546480 773 ntBASIC11.99□□□□□ -0.49
NPIPB4C9JG80 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 RN7SL357P-201ENST00000581065 298 ntBASIC11.99□□□□□ -0.49
NPIPB4C9JG80 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 ST5-261ENST00000626808 1071 ntTSL 5 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 RPL10-203ENST00000406022 748 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 HLA-DQB2-229ENST00000411527 1059 ntBASIC11.98□□□□□ -0.49
NPIPB4C9JG80 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 DPY19L2P5-201ENST00000456300 331 ntBASIC11.98□□□□□ -0.49
NPIPB4C9JG80 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 DLK1-205ENST00000556051 469 ntTSL 2 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 MT3-202ENST00000561640 514 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 AP001120.3-201ENST00000585729 489 ntBASIC11.98□□□□□ -0.49
NPIPB4C9JG80 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.98□□□□□ -0.49
NPIPB4C9JG80 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms