Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 AC063952.3-201ENST00000467756 308 ntBASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 AC106047.2-201ENST00000511723 743 ntBASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 AC019294.4-201ENST00000561777 2905 ntBASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 FAM187B2P-201ENST00000577135 713 ntBASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 AC007336.3-201ENST00000623886 2160 ntBASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 AC087386.2-201ENST00000623212 4637 ntBASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AC012531.1-201ENST00000562848 2680 ntBASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AC002350.2-201ENST00000623894 1828 ntBASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 MIR566-201ENST00000385187 94 ntBASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 SERF2-204ENST00000402131 586 ntTSL 2 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 MIR1301-201ENST00000408518 82 ntBASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AL080243.1-201ENST00000423293 1060 ntBASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AC104961.1-201ENST00000427605 771 ntBASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 RN7SL147P-201ENST00000487345 298 ntBASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 MIR497HG-202ENST00000572453 3838 ntBASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 HMGB1P24-201ENST00000611897 328 ntBASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 AC113385.2-201ENST00000614465 762 ntBASIC16.48■□□□□ 0.23
HMG20BQ9P0W2 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms