Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 AC106827.1-201ENST00000366454 431 ntBASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 Z69890.1-201ENST00000382990 339 ntBASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 RPL7P35-201ENST00000446943 740 ntBASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 RN7SL470P-201ENST00000583069 259 ntBASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 AL009176.1-201ENST00000607876 650 ntBASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 AC242376.2-201ENST00000619355 883 ntBASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 AC091769.1-201ENST00000619576 568 ntBASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 RN7SKP109-201ENST00000410592 316 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 AC092638.2-201ENST00000441105 947 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 AL354861.1-201ENST00000445213 355 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 AC093300.1-201ENST00000510368 1201 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 RN7SKP155-201ENST00000516031 288 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 RNA5SP417-201ENST00000516459 108 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 COX6A1P2-201ENST00000620597 330 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 LINC00244-201ENST00000625073 613 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 NCLP1-201ENST00000445357 1963 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 AC006480.2-201ENST00000609770 1337 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PARPBPQ9NWS1 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms