Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.72□□□□□ -0.37
HPS1Q92902 GBP1P1-201ENST00000394662 1740 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HPS1Q92902 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.72□□□□□ -0.37
HPS1Q92902 ATG10-IT1-201ENST00000396880 487 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 OR2X1P-201ENST00000421144 687 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 TLE1P1-201ENST00000422965 589 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.72□□□□□ -0.37
HPS1Q92902 AL121578.1-201ENST00000428051 892 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 MTX1P1-201ENST00000440904 838 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 AC004898.1-201ENST00000451057 766 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.72□□□□□ -0.37
HPS1Q92902 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.72□□□□□ -0.37
HPS1Q92902 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.72□□□□□ -0.37
HPS1Q92902 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC12.72□□□□□ -0.37
HPS1Q92902 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC12.72□□□□□ -0.37
HPS1Q92902 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC12.72□□□□□ -0.37
HPS1Q92902 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
HPS1Q92902 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.72□□□□□ -0.37
HPS1Q92902 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.72□□□□□ -0.37
HPS1Q92902 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.72□□□□□ -0.37
HPS1Q92902 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.72□□□□□ -0.37
HPS1Q92902 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 AC004623.1-201ENST00000624592 2127 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 AC244452.3-201ENST00000636814 210 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.72□□□□□ -0.37
HPS1Q92902 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC12.72□□□□□ -0.37
HPS1Q92902 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.72□□□□□ -0.37
HPS1Q92902 AL354861.3-201ENST00000600140 2412 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 AC022364.1-202ENST00000617468 2409 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC12.72□□□□□ -0.37
HPS1Q92902 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 DDO-201ENST00000368923 1953 ntTSL 2 BASIC12.72□□□□□ -0.37
HPS1Q92902 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 AL354989.2-201ENST00000435838 1540 ntBASIC12.72□□□□□ -0.37
HPS1Q92902 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.72□□□□□ -0.37
HPS1Q92902 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HPS1Q92902 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HPS1Q92902 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
HPS1Q92902 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.71□□□□□ -0.37
HPS1Q92902 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
HPS1Q92902 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
HPS1Q92902 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 MARK2P9-201ENST00000430958 1727 ntBASIC12.71□□□□□ -0.37
HPS1Q92902 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
HPS1Q92902 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.71□□□□□ -0.37
HPS1Q92902 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC12.71□□□□□ -0.37
HPS1Q92902 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HPS1Q92902 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
HPS1Q92902 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
HPS1Q92902 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.71□□□□□ -0.37
HPS1Q92902 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.71□□□□□ -0.37
HPS1Q92902 AL591846.1-201ENST00000451736 433 ntBASIC12.71□□□□□ -0.37
HPS1Q92902 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC12.71□□□□□ -0.37
HPS1Q92902 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HPS1Q92902 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.71□□□□□ -0.37
HPS1Q92902 FTLP10-202ENST00000505798 471 ntBASIC12.71□□□□□ -0.37
HPS1Q92902 AC026434.2-201ENST00000506094 1078 ntBASIC12.71□□□□□ -0.37
HPS1Q92902 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.71□□□□□ -0.37
HPS1Q92902 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.71□□□□□ -0.37
HPS1Q92902 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.71□□□□□ -0.37
HPS1Q92902 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.71□□□□□ -0.37
HPS1Q92902 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
HPS1Q92902 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms