Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 OR7E155P-201ENST00000412208 1014 ntBASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 HNRNPA1P25-201ENST00000422644 937 ntBASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 DPY19L2P4-201ENST00000479881 442 ntBASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 AC060766.1-201ENST00000590824 627 ntBASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 AP001462.1-201ENST00000594089 452 ntBASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 AL157996.1-201ENST00000624684 2299 ntBASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 OR2I1P-209ENST00000641730 5365 ntBASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 FDPSP7-201ENST00000429043 1054 ntBASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 PGK1P2-201ENST00000431702 1214 ntBASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 AC015818.1-201ENST00000451011 244 ntBASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 ISL1-203ENST00000511384 981 ntTSL 5 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 MIR6125-201ENST00000618986 96 ntBASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 AC005865.2-202ENST00000635814 725 ntBASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 MEP1AP1-201ENST00000636082 1097 ntBASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 AC011498.7-201ENST00000624986 2027 ntBASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTC1Q2NKJ3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 PES1P2-201ENST00000449745 1735 ntBASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 AC008620.2-201ENST00000510294 1569 ntBASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTC1Q2NKJ3 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 RNA5SP491-201ENST00000362936 118 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 OLA1P2-201ENST00000395519 1264 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 RN7SKP212-201ENST00000410851 328 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 HMGA1P1-201ENST00000415560 1062 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 IGKV1OR-2-201ENST00000457995 350 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 RN7SL684P-201ENST00000465665 294 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 RPL29P2-201ENST00000488409 460 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms