Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP1S2P56377 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
AP1S2P56377 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP1S2P56377 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
AP1S2P56377 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.29□□□□□ -0.28
AP1S2P56377 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.29□□□□□ -0.28
AP1S2P56377 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 AC026316.1-201ENST00000398900 414 ntBASIC13.29□□□□□ -0.28
AP1S2P56377 ABCD1P4-201ENST00000399687 604 ntBASIC13.29□□□□□ -0.28
AP1S2P56377 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.29□□□□□ -0.28
AP1S2P56377 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
AP1S2P56377 RN7SL375P-201ENST00000492442 298 ntBASIC13.29□□□□□ -0.28
AP1S2P56377 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP1S2P56377 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.29□□□□□ -0.28
AP1S2P56377 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.29□□□□□ -0.28
AP1S2P56377 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.29□□□□□ -0.28
AP1S2P56377 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.29□□□□□ -0.28
AP1S2P56377 MIR8071-1-201ENST00000616769 65 ntBASIC13.29□□□□□ -0.28
AP1S2P56377 MIR8071-2-201ENST00000616772 65 ntBASIC13.29□□□□□ -0.28
AP1S2P56377 AC011491.1-203ENST00000637688 543 ntBASIC13.29□□□□□ -0.28
AP1S2P56377 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP1S2P56377 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP1S2P56377 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.29□□□□□ -0.28
AP1S2P56377 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S2P56377 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.28□□□□□ -0.28
AP1S2P56377 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.28□□□□□ -0.28
AP1S2P56377 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.28□□□□□ -0.28
AP1S2P56377 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AP1S2P56377 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
AP1S2P56377 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 NUTM2HP-201ENST00000442076 2498 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AP1S2P56377 POM121L4P-202ENST00000427789 1891 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 PTPRVP-205ENST00000641549 5067 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 AP000356.3-201ENST00000382243 753 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 RN7SKP109-201ENST00000410592 316 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 AC041040.1-201ENST00000425197 460 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.28□□□□□ -0.28
AP1S2P56377 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.28□□□□□ -0.28
AP1S2P56377 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.28□□□□□ -0.28
AP1S2P56377 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 AC100858.1-201ENST00000514059 1228 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 IGHV1-12-201ENST00000518307 205 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.28□□□□□ -0.28
AP1S2P56377 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.28□□□□□ -0.28
AP1S2P56377 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.28□□□□□ -0.28
AP1S2P56377 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.28□□□□□ -0.28
AP1S2P56377 AC138894.2-201ENST00000602838 371 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 AL591926.3-201ENST00000611630 238 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 AC084781.1-201ENST00000613737 656 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 AC103691.2-201ENST00000618824 433 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.28□□□□□ -0.28
AP1S2P56377 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AP1S2P56377 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.28□□□□□ -0.28
AP1S2P56377 STRCP1-201ENST00000509801 5328 ntBASIC13.28□□□□□ -0.28
AP1S2P56377 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S2P56377 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.27□□□□□ -0.28
AP1S2P56377 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms