Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RFC3P40938 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.55□□□□□ -0.4
RFC3P40938 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RFC3P40938 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.55□□□□□ -0.4
RFC3P40938 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.55□□□□□ -0.4
RFC3P40938 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.55□□□□□ -0.4
RFC3P40938 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC12.55□□□□□ -0.4
RFC3P40938 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.55□□□□□ -0.4
RFC3P40938 GULOP-201ENST00000454030 748 ntBASIC12.55□□□□□ -0.4
RFC3P40938 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.55□□□□□ -0.4
RFC3P40938 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.55□□□□□ -0.4
RFC3P40938 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.55□□□□□ -0.4
RFC3P40938 MIR4326-201ENST00000582203 59 ntBASIC12.55□□□□□ -0.4
RFC3P40938 HMGB1P24-201ENST00000611897 328 ntBASIC12.55□□□□□ -0.4
RFC3P40938 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.55□□□□□ -0.4
RFC3P40938 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.55□□□□□ -0.4
RFC3P40938 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.55□□□□□ -0.4
RFC3P40938 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC12.55□□□□□ -0.4
RFC3P40938 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RFC3P40938 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 Z98885.3-201ENST00000624882 1757 ntBASIC12.55□□□□□ -0.4
RFC3P40938 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.55□□□□□ -0.4
RFC3P40938 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.55□□□□□ -0.4
RFC3P40938 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
RFC3P40938 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RFC3P40938 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.55□□□□□ -0.4
RFC3P40938 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.55□□□□□ -0.4
RFC3P40938 AC011700.1-201ENST00000610409 2627 ntBASIC12.55□□□□□ -0.4
RFC3P40938 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RFC3P40938 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.55□□□□□ -0.4
RFC3P40938 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.54□□□□□ -0.4
RFC3P40938 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 AC040160.2-201ENST00000623816 1675 ntBASIC12.54□□□□□ -0.4
RFC3P40938 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
RFC3P40938 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.54□□□□□ -0.4
RFC3P40938 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.54□□□□□ -0.4
RFC3P40938 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.54□□□□□ -0.4
RFC3P40938 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RFC3P40938 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.54□□□□□ -0.4
RFC3P40938 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.54□□□□□ -0.4
RFC3P40938 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.54□□□□□ -0.4
RFC3P40938 BCAS2P2-201ENST00000425064 674 ntBASIC12.54□□□□□ -0.4
RFC3P40938 KRT17P4-201ENST00000429445 819 ntBASIC12.54□□□□□ -0.4
RFC3P40938 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.54□□□□□ -0.4
RFC3P40938 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.54□□□□□ -0.4
RFC3P40938 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.54□□□□□ -0.4
RFC3P40938 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RFC3P40938 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.54□□□□□ -0.4
RFC3P40938 AC090136.2-201ENST00000517809 420 ntBASIC12.54□□□□□ -0.4
RFC3P40938 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 BAK1P2-201ENST00000532665 631 ntBASIC12.54□□□□□ -0.4
RFC3P40938 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC12.54□□□□□ -0.4
RFC3P40938 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.54□□□□□ -0.4
RFC3P40938 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.54□□□□□ -0.4
RFC3P40938 AC141586.1-203ENST00000567242 366 ntBASIC12.54□□□□□ -0.4
RFC3P40938 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.54□□□□□ -0.4
RFC3P40938 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.54□□□□□ -0.4
RFC3P40938 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.54□□□□□ -0.4
RFC3P40938 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC12.54□□□□□ -0.4
RFC3P40938 AC002472.4-201ENST00000641915 272 ntBASIC12.54□□□□□ -0.4
RFC3P40938 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.54□□□□□ -0.4
RFC3P40938 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFC3P40938 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms