Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 JPT1-205ENST00000470924 663 ntTSL 5 BASIC16.54■□□□□ 0.24
PDE6BP35913 RN7SL479P-201ENST00000472003 300 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 HINT1-204ENST00000506908 681 ntTSL 2 BASIC16.54■□□□□ 0.24
PDE6BP35913 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC16.54■□□□□ 0.24
PDE6BP35913 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC16.54■□□□□ 0.24
PDE6BP35913 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 FTH1-205ENST00000529631 507 ntTSL 4 BASIC16.54■□□□□ 0.24
PDE6BP35913 AC131274.3-201ENST00000578745 1271 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PDE6BP35913 AL137028.2-201ENST00000614601 256 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 FRG2EP-201ENST00000634243 835 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 LINC00643-207ENST00000637212 734 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 AC016397.2-201ENST00000624848 1985 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PDE6BP35913 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PDE6BP35913 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.54■□□□□ 0.24
PDE6BP35913 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
PDE6BP35913 ZSCAN5DP-201ENST00000600684 1488 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
PDE6BP35913 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PDE6BP35913 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PDE6BP35913 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC16.53■□□□□ 0.24
PDE6BP35913 TUBA3GP-201ENST00000410028 1325 ntBASIC16.53■□□□□ 0.24
PDE6BP35913 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PDE6BP35913 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 MIR324-201ENST00000362183 83 ntBASIC16.53■□□□□ 0.24
PDE6BP35913 U3.41-201ENST00000408711 219 ntBASIC16.53■□□□□ 0.24
PDE6BP35913 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC16.53■□□□□ 0.24
PDE6BP35913 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC16.53■□□□□ 0.24
PDE6BP35913 AC069421.1-201ENST00000447462 323 ntBASIC16.53■□□□□ 0.24
PDE6BP35913 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC16.53■□□□□ 0.24
PDE6BP35913 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC16.53■□□□□ 0.24
PDE6BP35913 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC16.53■□□□□ 0.24
PDE6BP35913 AC084262.1-201ENST00000567818 751 ntBASIC16.53■□□□□ 0.24
PDE6BP35913 MIR4539-201ENST00000579784 60 ntBASIC16.53■□□□□ 0.24
PDE6BP35913 KRT18P8-201ENST00000581937 1246 ntBASIC16.53■□□□□ 0.24
PDE6BP35913 AC063977.2-201ENST00000601996 421 ntBASIC16.53■□□□□ 0.24
PDE6BP35913 AC022382.1-201ENST00000602768 336 ntBASIC16.53■□□□□ 0.24
PDE6BP35913 AC116036.2-201ENST00000607592 462 ntBASIC16.53■□□□□ 0.24
PDE6BP35913 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PDE6BP35913 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PDE6BP35913 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PDE6BP35913 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.53■□□□□ 0.24
PDE6BP35913 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.53■□□□□ 0.24
PDE6BP35913 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC16.53■□□□□ 0.24
PDE6BP35913 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDE6BP35913 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PDE6BP35913 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.53■□□□□ 0.24
PDE6BP35913 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PDE6BP35913 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC16.52■□□□□ 0.24
PDE6BP35913 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
PDE6BP35913 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.52■□□□□ 0.24
PDE6BP35913 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PDE6BP35913 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC16.52■□□□□ 0.24
PDE6BP35913 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.52■□□□□ 0.24
PDE6BP35913 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC16.52■□□□□ 0.24
PDE6BP35913 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PDE6BP35913 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC16.52■□□□□ 0.24
PDE6BP35913 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC16.52■□□□□ 0.24
PDE6BP35913 HLA-DQB3-203ENST00000425319 356 ntBASIC16.52■□□□□ 0.24
PDE6BP35913 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC16.52■□□□□ 0.24
PDE6BP35913 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC16.52■□□□□ 0.24
PDE6BP35913 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC16.52■□□□□ 0.24
PDE6BP35913 AACSP1-202ENST00000521412 1095 ntBASIC16.52■□□□□ 0.24
PDE6BP35913 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC16.52■□□□□ 0.24
PDE6BP35913 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms