Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 AC008040.5-201ENST00000599781 1781 ntBASIC15.92■□□□□ 0.14
HLA-DOAP06340 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AC108024.1-201ENST00000626286 1721 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 NCLP1-201ENST00000445357 1963 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 RN7SKP255-201ENST00000363442 313 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 RN7SKP203-201ENST00000363618 332 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 RN7SKP71-201ENST00000364558 318 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 7SK.1-201ENST00000365328 331 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 MIR632-201ENST00000385193 94 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 KRT18P33-201ENST00000398525 1043 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 CFL1P6-201ENST00000400899 494 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 RPL35P1-201ENST00000450819 370 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 MIR2278-201ENST00000516344 96 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AC011477.7-201ENST00000617163 1440 ntBASIC15.91■□□□□ 0.14
HLA-DOAP06340 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DOAP06340 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DOAP06340 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DOAP06340 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DOAP06340 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DOAP06340 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DOAP06340 FAM90A12P-201ENST00000519497 2375 ntBASIC15.9■□□□□ 0.14
HLA-DOAP06340 FAM90A24P-201ENST00000520792 2369 ntBASIC15.9■□□□□ 0.14
HLA-DOAP06340 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DOAP06340 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 SRL-202ENST00000537996 1814 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DOAP06340 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 NHP2P1-201ENST00000335274 462 ntBASIC15.9■□□□□ 0.14
HLA-DOAP06340 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DOAP06340 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DOAP06340 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DOAP06340 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC15.9■□□□□ 0.14
HLA-DOAP06340 HLA-W-207ENST00000439514 771 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms