Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NACAE9PAV3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC10.11□□□□□ -0.79
NACAE9PAV3 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
NACAE9PAV3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
NACAE9PAV3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
NACAE9PAV3 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
NACAE9PAV3 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NACAE9PAV3 AC007614.5-201ENST00000623424 8892 ntBASIC10.11□□□□□ -0.79
NACAE9PAV3 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.11□□□□□ -0.79
NACAE9PAV3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
NACAE9PAV3 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
NACAE9PAV3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
NACAE9PAV3 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
NACAE9PAV3 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
NACAE9PAV3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
NACAE9PAV3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
NACAE9PAV3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC10.1□□□□□ -0.79
NACAE9PAV3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC10.1□□□□□ -0.79
NACAE9PAV3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC10.1□□□□□ -0.79
NACAE9PAV3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC10.1□□□□□ -0.79
NACAE9PAV3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
NACAE9PAV3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC10.1□□□□□ -0.79
NACAE9PAV3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.1□□□□□ -0.79
NACAE9PAV3 COG4-212ENST00000564653 590 ntTSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC10.1□□□□□ -0.79
NACAE9PAV3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 AC079336.7-201ENST00000623428 1078 ntBASIC10.1□□□□□ -0.79
NACAE9PAV3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC10.1□□□□□ -0.79
NACAE9PAV3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 AC100757.4-201ENST00000626934 759 ntBASIC10.1□□□□□ -0.79
NACAE9PAV3 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 NUTM2HP-201ENST00000442076 2498 ntBASIC10.1□□□□□ -0.79
NACAE9PAV3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 Z98885.3-201ENST00000624882 1757 ntBASIC10.1□□□□□ -0.79
NACAE9PAV3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC10.1□□□□□ -0.79
NACAE9PAV3 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
NACAE9PAV3 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
NACAE9PAV3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC10.1□□□□□ -0.79
NACAE9PAV3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC10.1□□□□□ -0.79
NACAE9PAV3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
NACAE9PAV3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC10.1□□□□□ -0.79
NACAE9PAV3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC10.1□□□□□ -0.79
NACAE9PAV3 CEP164P1-201ENST00000455142 418 ntBASIC10.1□□□□□ -0.79
NACAE9PAV3 KRT18P15-201ENST00000458108 1291 ntBASIC10.1□□□□□ -0.79
NACAE9PAV3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC10.1□□□□□ -0.79
NACAE9PAV3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC10.1□□□□□ -0.79
NACAE9PAV3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC10.1□□□□□ -0.79
NACAE9PAV3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC10.1□□□□□ -0.79
NACAE9PAV3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC10.1□□□□□ -0.79
NACAE9PAV3 AC009884.2-201ENST00000603110 324 ntBASIC10.1□□□□□ -0.79
NACAE9PAV3 SPCS2P2-201ENST00000603270 608 ntBASIC10.1□□□□□ -0.79
NACAE9PAV3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
NACAE9PAV3 AL162426.1-201ENST00000624141 743 ntBASIC10.1□□□□□ -0.79
NACAE9PAV3 AC004923.1-202ENST00000642106 209 ntBASIC10.1□□□□□ -0.79
NACAE9PAV3 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NACAE9PAV3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms