Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 AC113935.1-201ENST00000471722 555 ntBASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 AC009779.1-201ENST00000551138 283 ntBASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
AMBRA1Q9C0C7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 AC104590.1-202ENST00000558368 1921 ntBASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 RN7SL530P-201ENST00000485097 298 ntBASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 SLC25A15P3-201ENST00000505530 290 ntBASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 AL645939.5-201ENST00000606834 243 ntBASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 AC007336.3-201ENST00000623886 2160 ntBASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC12.8□□□□□ -0.36
AMBRA1Q9C0C7 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 351.1 ms