Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 SIRPB3P-201ENST00000340424 1216 ntBASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 RNA5SP491-201ENST00000362936 118 ntBASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 PGAM1P11-201ENST00000416729 680 ntBASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AK2P2-201ENST00000439142 405 ntBASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 RPL3P5-201ENST00000441645 1232 ntBASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AC092896.1-201ENST00000465850 380 ntBASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AC025594.1-201ENST00000469533 543 ntBASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 FAM187B2P-201ENST00000577135 713 ntBASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 NAV1-210ENST00000593583 726 ntBASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AF013593.1-201ENST00000458074 1487 ntBASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 RCC2P5-201ENST00000492126 1487 ntBASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHKBP1Q8TBC3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 AC103563.1-201ENST00000429316 123 ntBASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 AGAP12P-201ENST00000585227 2359 ntBASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 AL445209.1-201ENST00000607269 3491 ntBASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 AP003392.6-201ENST00000607709 325 ntBASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms