Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP7AQ04656 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ATP7AQ04656 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP7AQ04656 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP7AQ04656 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP7AQ04656 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP7AQ04656 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP7AQ04656 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP7AQ04656 CD27-AS1-201ENST00000399492 1094 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP7AQ04656 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP7AQ04656 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ATP7AQ04656 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
ATP7AQ04656 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP7AQ04656 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP7AQ04656 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP7AQ04656 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP7AQ04656 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP7AQ04656 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC19.39■□□□□ 0.69
ATP7AQ04656 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP7AQ04656 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP7AQ04656 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP7AQ04656 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP7AQ04656 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP7AQ04656 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP7AQ04656 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP7AQ04656 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP7AQ04656 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
ATP7AQ04656 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP7AQ04656 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC19.38■□□□□ 0.69
ATP7AQ04656 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ATP7AQ04656 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
ATP7AQ04656 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ATP7AQ04656 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP7AQ04656 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ATP7AQ04656 CYP4F60P-201ENST00000439449 549 ntBASIC19.38■□□□□ 0.69
ATP7AQ04656 AC023157.1-201ENST00000453713 402 ntBASIC19.38■□□□□ 0.69
ATP7AQ04656 RN7SL340P-201ENST00000470792 296 ntBASIC19.38■□□□□ 0.69
ATP7AQ04656 CDK2AP2P2-201ENST00000478512 367 ntBASIC19.38■□□□□ 0.69
ATP7AQ04656 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP7AQ04656 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP7AQ04656 RPL30-213ENST00000523172 274 ntTSL 5 BASIC19.38■□□□□ 0.69
ATP7AQ04656 ABCC6P2-201ENST00000526069 590 ntBASIC19.38■□□□□ 0.69
ATP7AQ04656 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC19.38■□□□□ 0.69
ATP7AQ04656 MT1G-204ENST00000569500 305 ntTSL 3 BASIC19.38■□□□□ 0.69
ATP7AQ04656 MIR4459-201ENST00000581837 66 ntBASIC19.38■□□□□ 0.69
ATP7AQ04656 MIR1914-201ENST00000607800 80 ntBASIC19.38■□□□□ 0.69
ATP7AQ04656 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC19.38■□□□□ 0.69
ATP7AQ04656 AC010335.3-201ENST00000623767 531 ntBASIC19.38■□□□□ 0.69
ATP7AQ04656 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC19.38■□□□□ 0.69
ATP7AQ04656 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
ATP7AQ04656 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP7AQ04656 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP7AQ04656 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP7AQ04656 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP7AQ04656 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP7AQ04656 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP7AQ04656 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP7AQ04656 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP7AQ04656 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ATP7AQ04656 CICP9-201ENST00000444451 1913 ntBASIC19.38■□□□□ 0.69
ATP7AQ04656 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP7AQ04656 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 PABPC1P2-201ENST00000471997 1805 ntBASIC19.37■□□□□ 0.69
ATP7AQ04656 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP7AQ04656 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
ATP7AQ04656 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 PARK7-204ENST00000377493 795 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP7AQ04656 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
ATP7AQ04656 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC19.37■□□□□ 0.69
ATP7AQ04656 MAS1LP1-206ENST00000419416 1047 ntBASIC19.37■□□□□ 0.69
ATP7AQ04656 AC253536.2-201ENST00000423307 254 ntBASIC19.37■□□□□ 0.69
ATP7AQ04656 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP7AQ04656 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP7AQ04656 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ATP7AQ04656 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
ATP7AQ04656 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
ATP7AQ04656 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP7AQ04656 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ATP7AQ04656 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP7AQ04656 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP7AQ04656 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP7AQ04656 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP7AQ04656 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP7AQ04656 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP7AQ04656 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP7AQ04656 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP7AQ04656 MGST3-204ENST00000367888 778 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms