Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.66□□□□□ -0.06
SSR1P43307 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SSR1P43307 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SSR1P43307 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SSR1P43307 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.66□□□□□ -0.06
SSR1P43307 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
SSR1P43307 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SSR1P43307 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 AL157791.1-201ENST00000553667 1699 ntBASIC14.65□□□□□ -0.06
SSR1P43307 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC14.65□□□□□ -0.06
SSR1P43307 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
SSR1P43307 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 AC004554.1-201ENST00000422830 1468 ntBASIC14.65□□□□□ -0.06
SSR1P43307 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
SSR1P43307 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.65□□□□□ -0.06
SSR1P43307 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SSR1P43307 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.65□□□□□ -0.06
SSR1P43307 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.65□□□□□ -0.06
SSR1P43307 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SSR1P43307 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.65□□□□□ -0.06
SSR1P43307 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.65□□□□□ -0.06
SSR1P43307 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.65□□□□□ -0.06
SSR1P43307 AC004898.1-201ENST00000451057 766 ntBASIC14.65□□□□□ -0.06
SSR1P43307 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
SSR1P43307 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.65□□□□□ -0.06
SSR1P43307 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.65□□□□□ -0.06
SSR1P43307 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.65□□□□□ -0.06
SSR1P43307 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.65□□□□□ -0.06
SSR1P43307 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.65□□□□□ -0.06
SSR1P43307 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.65□□□□□ -0.06
SSR1P43307 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC14.65□□□□□ -0.06
SSR1P43307 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
SSR1P43307 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SSR1P43307 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSR1P43307 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
SSR1P43307 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC14.64□□□□□ -0.07
SSR1P43307 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SSR1P43307 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.64□□□□□ -0.07
SSR1P43307 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 CICP7-201ENST00000432723 2477 ntBASIC14.64□□□□□ -0.07
SSR1P43307 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC14.64□□□□□ -0.07
SSR1P43307 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
SSR1P43307 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 BX679664.3-201ENST00000414070 555 ntBASIC14.64□□□□□ -0.07
SSR1P43307 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.64□□□□□ -0.07
SSR1P43307 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 AC113935.1-201ENST00000471722 555 ntBASIC14.64□□□□□ -0.07
SSR1P43307 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.64□□□□□ -0.07
SSR1P43307 AC243960.2-201ENST00000600996 747 ntBASIC14.64□□□□□ -0.07
SSR1P43307 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
SSR1P43307 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC14.64□□□□□ -0.07
SSR1P43307 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC14.64□□□□□ -0.07
SSR1P43307 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.64□□□□□ -0.07
SSR1P43307 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.64□□□□□ -0.07
SSR1P43307 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.64□□□□□ -0.07
SSR1P43307 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms