Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBEC1P41238 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBEC1P41238 CICP9-201ENST00000444451 1913 ntBASIC12.35□□□□□ -0.43
APOBEC1P41238 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBEC1P41238 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBEC1P41238 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.35□□□□□ -0.43
APOBEC1P41238 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBEC1P41238 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOBEC1P41238 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.34□□□□□ -0.43
APOBEC1P41238 AC019294.4-201ENST00000561777 2905 ntBASIC12.34□□□□□ -0.43
APOBEC1P41238 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
APOBEC1P41238 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.34□□□□□ -0.43
APOBEC1P41238 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.34□□□□□ -0.43
APOBEC1P41238 NUTM2HP-201ENST00000442076 2498 ntBASIC12.34□□□□□ -0.43
APOBEC1P41238 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
APOBEC1P41238 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 KRT8P42-201ENST00000405771 1399 ntBASIC12.34□□□□□ -0.43
APOBEC1P41238 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOBEC1P41238 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
APOBEC1P41238 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.34□□□□□ -0.43
APOBEC1P41238 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.34□□□□□ -0.43
APOBEC1P41238 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC12.34□□□□□ -0.43
APOBEC1P41238 AC092638.2-201ENST00000441105 947 ntBASIC12.34□□□□□ -0.43
APOBEC1P41238 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.34□□□□□ -0.43
APOBEC1P41238 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.34□□□□□ -0.43
APOBEC1P41238 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.34□□□□□ -0.43
APOBEC1P41238 RHOQP1-201ENST00000555758 579 ntBASIC12.34□□□□□ -0.43
APOBEC1P41238 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.34□□□□□ -0.43
APOBEC1P41238 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
APOBEC1P41238 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.34□□□□□ -0.43
APOBEC1P41238 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.34□□□□□ -0.43
APOBEC1P41238 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
APOBEC1P41238 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.34□□□□□ -0.43
APOBEC1P41238 AC005618.3-201ENST00000624928 458 ntBASIC12.34□□□□□ -0.43
APOBEC1P41238 AC128714.1-201ENST00000637035 887 ntBASIC12.34□□□□□ -0.43
APOBEC1P41238 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOBEC1P41238 AL445209.1-201ENST00000607269 3491 ntBASIC12.34□□□□□ -0.43
APOBEC1P41238 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.34□□□□□ -0.43
APOBEC1P41238 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
APOBEC1P41238 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.34□□□□□ -0.43
APOBEC1P41238 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
APOBEC1P41238 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBEC1P41238 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
APOBEC1P41238 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
APOBEC1P41238 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
APOBEC1P41238 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
APOBEC1P41238 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
APOBEC1P41238 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
APOBEC1P41238 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.33□□□□□ -0.43
APOBEC1P41238 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.33□□□□□ -0.43
APOBEC1P41238 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.33□□□□□ -0.43
APOBEC1P41238 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.33□□□□□ -0.44
APOBEC1P41238 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 AC078991.1-201ENST00000437297 610 ntBASIC12.33□□□□□ -0.44
APOBEC1P41238 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.33□□□□□ -0.44
APOBEC1P41238 RPL7P35-201ENST00000446943 740 ntBASIC12.33□□□□□ -0.44
APOBEC1P41238 GULOP-201ENST00000454030 748 ntBASIC12.33□□□□□ -0.44
APOBEC1P41238 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC12.33□□□□□ -0.44
APOBEC1P41238 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.33□□□□□ -0.44
APOBEC1P41238 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.33□□□□□ -0.44
APOBEC1P41238 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms