Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.94■□□□□ 0.3
COL15A1P39059 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL15A1P39059 AC104581.4-201ENST00000623126 3052 ntBASIC16.93■□□□□ 0.3
COL15A1P39059 AL591499.1-201ENST00000307155 1153 ntBASIC16.93■□□□□ 0.3
COL15A1P39059 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC16.93■□□□□ 0.3
COL15A1P39059 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
COL15A1P39059 SAP18P2-201ENST00000434334 459 ntBASIC16.93■□□□□ 0.3
COL15A1P39059 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC16.93■□□□□ 0.3
COL15A1P39059 AL161727.1-201ENST00000457409 530 ntBASIC16.93■□□□□ 0.3
COL15A1P39059 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC16.93■□□□□ 0.3
COL15A1P39059 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC16.93■□□□□ 0.3
COL15A1P39059 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC16.93■□□□□ 0.3
COL15A1P39059 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
COL15A1P39059 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC16.93■□□□□ 0.3
COL15A1P39059 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC16.93■□□□□ 0.3
COL15A1P39059 TLE2-205ENST00000586422 389 ntTSL 5 BASIC16.93■□□□□ 0.3
COL15A1P39059 AC009812.1-201ENST00000605948 1059 ntBASIC16.93■□□□□ 0.3
COL15A1P39059 AL109954.3-201ENST00000615088 558 ntBASIC16.93■□□□□ 0.3
COL15A1P39059 DUX4L33-201ENST00000635217 958 ntBASIC16.93■□□□□ 0.3
COL15A1P39059 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC16.93■□□□□ 0.3
COL15A1P39059 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 AC105206.1-202ENST00000314927 2368 ntBASIC16.93■□□□□ 0.3
COL15A1P39059 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.93■□□□□ 0.3
COL15A1P39059 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COL15A1P39059 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL15A1P39059 AC073548.1-201ENST00000624088 1882 ntBASIC16.93■□□□□ 0.3
COL15A1P39059 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
COL15A1P39059 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.93■□□□□ 0.3
COL15A1P39059 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC16.93■□□□□ 0.3
COL15A1P39059 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL15A1P39059 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
COL15A1P39059 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COL15A1P39059 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC16.92■□□□□ 0.3
COL15A1P39059 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 NOS2P3-201ENST00000411468 867 ntBASIC16.92■□□□□ 0.3
COL15A1P39059 NOS2P2-201ENST00000426269 867 ntBASIC16.92■□□□□ 0.3
COL15A1P39059 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COL15A1P39059 RN7SL846P-201ENST00000467429 292 ntBASIC16.92■□□□□ 0.3
COL15A1P39059 RN7SL22P-201ENST00000471800 269 ntBASIC16.92■□□□□ 0.3
COL15A1P39059 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COL15A1P39059 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC16.92■□□□□ 0.3
COL15A1P39059 SLC25A51P3-201ENST00000521814 889 ntBASIC16.92■□□□□ 0.3
COL15A1P39059 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC16.92■□□□□ 0.3
COL15A1P39059 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC16.92■□□□□ 0.3
COL15A1P39059 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COL15A1P39059 NF1P11-201ENST00000621292 1282 ntBASIC16.92■□□□□ 0.3
COL15A1P39059 AC010601.2-201ENST00000623060 774 ntBASIC16.92■□□□□ 0.3
COL15A1P39059 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC16.92■□□□□ 0.3
COL15A1P39059 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC16.92■□□□□ 0.3
COL15A1P39059 NORAD-201ENST00000565493 5339 ntBASIC16.92■□□□□ 0.3
COL15A1P39059 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
COL15A1P39059 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 TBC1D3P1-201ENST00000590047 1693 ntBASIC16.92■□□□□ 0.3
COL15A1P39059 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.92■□□□□ 0.3
COL15A1P39059 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
COL15A1P39059 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COL15A1P39059 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC16.92■□□□□ 0.3
COL15A1P39059 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.92■□□□□ 0.3
COL15A1P39059 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC16.92■□□□□ 0.3
COL15A1P39059 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.92■□□□□ 0.3
COL15A1P39059 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL15A1P39059 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COL15A1P39059 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
COL15A1P39059 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 KRT8P6-201ENST00000399259 1207 ntBASIC16.91■□□□□ 0.3
COL15A1P39059 CACYBPP3-201ENST00000406011 625 ntBASIC16.91■□□□□ 0.3
COL15A1P39059 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 POLR2LP1-206ENST00000444785 187 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms