Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCN1P35523 CSF2RBP1-201ENST00000447905 391 ntBASIC15.59■□□□□ 0.09
CLCN1P35523 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.59■□□□□ 0.09
CLCN1P35523 AC119751.2-201ENST00000504529 210 ntBASIC15.59■□□□□ 0.09
CLCN1P35523 AC104989.1-201ENST00000519711 778 ntBASIC15.59■□□□□ 0.09
CLCN1P35523 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.59■□□□□ 0.09
CLCN1P35523 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.59■□□□□ 0.09
CLCN1P35523 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCN1P35523 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.59■□□□□ 0.09
CLCN1P35523 AC005586.2-201ENST00000563946 837 ntBASIC15.59■□□□□ 0.09
CLCN1P35523 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CLCN1P35523 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 FOXD2-AS1-201ENST00000445551 2509 ntBASIC15.59■□□□□ 0.09
CLCN1P35523 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCN1P35523 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CLCN1P35523 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CLCN1P35523 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCN1P35523 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLCN1P35523 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.59■□□□□ 0.09
CLCN1P35523 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCN1P35523 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 DBH-202ENST00000393056 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN1P35523 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN1P35523 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.58■□□□□ 0.09
CLCN1P35523 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN1P35523 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
CLCN1P35523 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN1P35523 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN1P35523 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN1P35523 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN1P35523 IYD-208ENST00000500320 2158 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN1P35523 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN1P35523 AC099336.1-201ENST00000417053 1171 ntBASIC15.58■□□□□ 0.08
CLCN1P35523 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.58■□□□□ 0.08
CLCN1P35523 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC15.58■□□□□ 0.08
CLCN1P35523 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN1P35523 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN1P35523 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN1P35523 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 AC063926.2-201ENST00000623766 1308 ntBASIC15.58■□□□□ 0.08
CLCN1P35523 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CLCN1P35523 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN1P35523 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN1P35523 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN1P35523 FAM47DP-201ENST00000402340 3290 ntBASIC15.58■□□□□ 0.08
CLCN1P35523 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CLCN1P35523 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN1P35523 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CLCN1P35523 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN1P35523 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLCN1P35523 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLCN1P35523 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 MYL9-201ENST00000279022 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.57■□□□□ 0.08
CLCN1P35523 HLA-V-201ENST00000429037 534 ntBASIC15.57■□□□□ 0.08
CLCN1P35523 AL157407.1-201ENST00000435784 904 ntBASIC15.57■□□□□ 0.08
CLCN1P35523 AL645933.1-201ENST00000440087 609 ntBASIC15.57■□□□□ 0.08
CLCN1P35523 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCN1P35523 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLCN1P35523 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCN1P35523 HILS1-202ENST00000545329 423 ntBASIC15.57■□□□□ 0.08
CLCN1P35523 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CLCN1P35523 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLCN1P35523 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms