Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.46□□□□□ -0.41
P04436 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 AC024075.2-201ENST00000598112 1473 ntBASIC12.46□□□□□ -0.41
P04436 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
P04436 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
P04436 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
P04436 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.46□□□□□ -0.41
P04436 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
P04436 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC12.46□□□□□ -0.41
P04436 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
P04436 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.46□□□□□ -0.41
P04436 AL512599.1-201ENST00000430724 685 ntBASIC12.46□□□□□ -0.41
P04436 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.46□□□□□ -0.41
P04436 PSMD4P1-201ENST00000433951 1109 ntBASIC12.46□□□□□ -0.41
P04436 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.46□□□□□ -0.41
P04436 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 BPIFB5P-201ENST00000457066 1099 ntBASIC12.46□□□□□ -0.41
P04436 RN7SL494P-201ENST00000461517 304 ntBASIC12.46□□□□□ -0.41
P04436 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC12.46□□□□□ -0.41
P04436 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 TREHP1-201ENST00000531328 465 ntBASIC12.46□□□□□ -0.41
P04436 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.46□□□□□ -0.41
P04436 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
P04436 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.46□□□□□ -0.41
P04436 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.46□□□□□ -0.41
P04436 FAM187B2P-201ENST00000577135 713 ntBASIC12.46□□□□□ -0.41
P04436 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.46□□□□□ -0.41
P04436 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
P04436 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC12.46□□□□□ -0.41
P04436 AC073869.4-201ENST00000620841 800 ntBASIC12.46□□□□□ -0.41
P04436 AC137723.2-201ENST00000623540 398 ntBASIC12.46□□□□□ -0.41
P04436 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
P04436 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04436 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
P04436 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
P04436 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.46□□□□□ -0.41
P04436 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
P04436 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
P04436 BEND3P1-201ENST00000421591 1944 ntBASIC12.46□□□□□ -0.42
P04436 AC092123.2-201ENST00000611189 5421 ntBASIC12.46□□□□□ -0.42
P04436 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04436 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
P04436 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04436 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
P04436 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
P04436 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
P04436 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.46□□□□□ -0.42
P04436 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04436 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04436 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04436 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04436 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
P04436 AL109809.1-201ENST00000418979 1367 ntBASIC12.45□□□□□ -0.42
P04436 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
P04436 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.45□□□□□ -0.42
P04436 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.45□□□□□ -0.42
P04436 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
P04436 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
P04436 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
P04436 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P04436 AL355334.1-201ENST00000417713 215 ntBASIC12.45□□□□□ -0.42
P04436 OR51A9P-201ENST00000422578 911 ntBASIC12.45□□□□□ -0.42
P04436 AC114501.1-201ENST00000445949 172 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms