Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 AC078776.1-201ENST00000546558 562 ntTSL 4 BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 C14orf2-208ENST00000554713 1058 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 DIO3OS-209ENST00000556266 401 ntTSL 3 BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 AC051619.8-201ENST00000563103 308 ntBASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 AC011487.4-201ENST00000616855 525 ntBASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 NEAT1_1.1-201ENST00000620348 120 ntBASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 PCNA-201ENST00000379143 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 RIC3-204ENST00000419822 1300 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 AC020917.4-201ENST00000623994 1999 ntBASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 NSMCE2-201ENST00000287437 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 OR10V1-201ENST00000307552 930 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 AC074389.2-201ENST00000421380 437 ntTSL 3 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 AL513523.3-201ENST00000434575 316 ntTSL 2 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 SOX5-204ENST00000441133 638 ntTSL 2 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 RPL14P3-201ENST00000476715 622 ntBASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 LINC02106-202ENST00000513880 225 ntTSL 3 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 LAMTOR1-202ENST00000535107 619 ntTSL 3 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 AP001453.2-201ENST00000544553 391 ntTSL 2 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 APOC1P1-204ENST00000575148 560 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 APOC4-APOC2-202ENST00000589057 680 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIMBP3Q9UFD9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 RN7SKP90-201ENST00000363013 335 ntBASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 AL157395.1-201ENST00000427630 438 ntTSL 3 BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 PHKG1P4-201ENST00000430144 370 ntBASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 AL359504.1-201ENST00000448052 493 ntBASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 PARPBP-210ENST00000541394 2452 ntTSL 2 BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 AC018552.4-201ENST00000563251 556 ntTSL 4 BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 ACTG1P16-201ENST00000564713 1082 ntBASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 IGHV2OR16-5-201ENST00000567458 358 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 ABHD17AP7-201ENST00000569060 595 ntBASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 CBWD1-222ENST00000613508 1143 ntTSL 5 BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 LINC00222-202ENST00000416104 1785 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
RIMBP3Q9UFD9 MPHOSPH6-201ENST00000258169 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 OR2B11-201ENST00000318749 1054 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 CSH1-202ENST00000329882 1073 ntTSL 2 BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 HORMAD2-AS1-201ENST00000429350 902 ntTSL 3 BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 RPLP1P13-201ENST00000434567 299 ntBASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 SPTLC1P4-201ENST00000435997 260 ntBASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 HSD3BP2-201ENST00000457615 1118 ntBASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 AC104445.1-201ENST00000460597 749 ntTSL 3 BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 AC018620.1-201ENST00000523233 379 ntBASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 AC012236.1-202ENST00000558388 1024 ntTSL 2 BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 AC023824.6-201ENST00000565523 703 ntTSL 2 BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 ACSM5-205ENST00000575070 856 ntTSL 3 BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 AC145207.7-201ENST00000580125 958 ntBASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 AC016866.1-201ENST00000584252 659 ntTSL 5 BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 AC008750.4-201ENST00000600974 219 ntTSL 3 BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 EMG1-206ENST00000607161 1087 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 DSTYK-203ENST00000615388 1042 ntTSL 5 BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 LINC02486-201ENST00000604157 3000 ntBASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RIMBP3Q9UFD9 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
RIMBP3Q9UFD9 ANKS1B-210ENST00000547446 1690 ntTSL 2 BASIC20.26■□□□□ 0.83
RIMBP3Q9UFD9 AC020629.1-201ENST00000550858 1650 ntBASIC20.26■□□□□ 0.83
RIMBP3Q9UFD9 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RIMBP3Q9UFD9 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIMBP3Q9UFD9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC20.26■□□□□ 0.83
RIMBP3Q9UFD9 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIMBP3Q9UFD9 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RIMBP3Q9UFD9 TMLHE-201ENST00000334398 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIMBP3Q9UFD9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIMBP3Q9UFD9 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms